Factsheet for HORVU7Hr1G031190.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G062160.1
HORVU2Hr1G003370.11
HORVU2Hr1G028500.1
HORVU2Hr1G029330.11
HORVU2Hr1G060120.1
HORVU3Hr1G095800.1
HORVU4Hr1G047140.6
HORVU5Hr1G008340.2
HORVU5Hr1G093160.3
HORVU5Hr1G103400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12620.1	HORVU2Hr1G028500.1	AT1G26840.1	16179646
AT4G12620.1	HORVU1Hr1G062160.1	AT5G13060.1	18818695
AT4G14700.1	HORVU2Hr1G060120.1	AT1G30210.1	18818695
AT4G14700.1	HORVU5Hr1G008340.2	AT1G30210.1	18818695
AT4G14700.1	HORVU5Hr1G103400.1	AT1G30210.1	18818695
AT4G14700.1	HORVU3Hr1G095800.1	AT3G04620.1	20706207
AT4G14700.1	HORVU2Hr1G003370.11	AT3G54710.1	18818695
AT4G14700.1	HORVU4Hr1G047140.6	AT3G54710.1	18818695
AT4G14700.1	HORVU5Hr1G093160.3	AT4G16630.1	20706207
AT4G14700.1	HORVU1Hr1G062160.1	AT5G13060.1	18818695
AT4G14700.1	HORVU2Hr1G029330.11	AT5G16690.1	18818695

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G153500.1	Wheat	plastid	80.23	91.56
TraesCS7A01G151700.1	Wheat	plastid	75.26	90.93
TraesCS7B01G055600.1	Wheat	nucleus	80.87	86.34
HORVU3Hr1G033880.2	Barley	plastid	22.83	83.08
OQU75979	Sorghum	plastid	70.61	82.47
Zm00001d045080_P001	Maize	plastid	68.5	79.22
Zm00001d037086_P006	Maize	nucleus, plastid	68.08	72.77
VIT_06s0004g00530.t01	Wine grape	cytosol	42.92	62.85
GSMUA_Achr8P31340_001	Banana	nucleus	52.85	62.5
PGSC0003DMT400033355	Potato	cytosol	5.92	61.54
KRH23133	Soybean	nucleus	52.54	58.4
Solyc03g006420.2.1	Tomato	nucleus	51.06	58.12
PGSC0003DMT400033353	Potato	nucleus, plastid	44.93	56.82
AT4G14700.1	Thale cress	plastid	48.31	56.49
KRH10202	Soybean	nucleus	50.95	56.44
CDY62377	Canola	plastid	48.2	55.88
CDY16697	Canola	plastid	47.78	55.87
Bra029471.1-P	Field mustard	plastid	47.89	55.72
AT4G12620.1	Thale cress	plastid	47.67	55.47
VIT_06s0004g02050.t01	Wine grape	nucleus	51.59	53.74
VIT_13s0175g00030.t01	Wine grape	extracellular	6.87	41.4
HORVU3Hr1G084800.19	Barley	plastid	11.52	23.39

Protein Annotations

Gene3D:1.10.8.1280	MapMan:13.2.1.1.1	Gene3D:3.30.40.10	Gene3D:3.40.50.300	UniProt:A0A287VXN3	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	InterPro:BAH_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003682	GO:GO:0005488
GO:GO:0005524	GO:GO:0046872	EnsemblPlantsGene:HORVU7Hr1G031190	EnsemblPlants:HORVU7Hr1G031190.2	InterPro:IPR001025	InterPro:IPR013083
InterPro:IPR019787	InterPro:ORC1	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF00628	PFAM:PF01426
ScanProsite:PS01359	PFscan:PS50016	PFscan:PS51038	PANTHER:PTHR10763	PANTHER:PTHR10763:SF23	SMART:SM00249
SMART:SM00382	SMART:SM00439	SUPFAM:SSF52540	SUPFAM:SSF57903	UniParc:UPI000B466BBA	InterPro:Zinc_finger_PHD-type_CS
InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:63108524..63115872

Molecular Weight (calculated)

106116.0 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.498

Length

946 amino acids

Sequence
(BLAST)

001: PISVFRISTE FTVVLLPCPL NRITAQAAPS HLALAPSAAG KRPRRAPPRP APPPLTIAGA PYPPPSLAAA PLPHRRLCRA DPPARCPQRE APRAPHCRRR
101: PCSPIPPWEI CLFRVCASAN ASASATPIRS SPSKAMAAAA QMEFSTPSKP TPRRKSKSVA SPPPMSPATP STVRRSSRLL ETPAKDLSEA ALFETPAKPK
201: PKAVLFETPA KPKPAPTLKR KRAAPSPSPK TPTQTERKPK RQRRLPTNRV YYRKVVYDGG EFAAGDDVYI KRLEGEESDA EDPEAEDCRV CFRAGGGVMV
301: ECDACLGGFH LRCVRPPLRR VPEGDWACPY CKAEHEGRAM DRPKPPVGKK IKRTAKEKLL ASDLWAARIE SLRREPDGAF WAKVRWYTIP EETAAGRQPH
401: NLRRELYRTN DVGDIEMETI LRHCFVMSPK EFRDAANDGD DVFYCEYEYD IHWHNFKRLA DIDDEPETKE DPSDEPYNAA DDYNSDTDVD SEYDEEDEPA
501: ARCSARKNQS NEKILPANSW KGRIYGLQKI GIRKIPEHVR CHQKTALEKA KATLLLATLP KSLPCRDKEM EEISTFVKDA ICNDHCLGRC LYIHGVPGTG
601: KTMSVLAVMR RLRSEFDSGA LRPYCFIEIN GLKLASPENI YKVIYEQLSG HRVGWKKALH YLTQHFSDGK KIGKQANQPI VLLIDELDLL LTRNQSVLYN
701: ILDWPTKPNS NLVIIGIANT MDLPEKLLPR ISSRMGIQRL CFGPYNYRQL QEIITSRLKG INAFEDQAIE FASRKVAAMS GDARRALEIC RRAAEFADYR
801: VKQFQQVEQT PSSANIGNGF VCMGDIEDAI QEVFQAPHIQ VMKNCPKFGK VILAAMVHEL YRSGLGEVLF DKLAATVFSW CHVNREILPG YDTLLKICCK
901: LGESKIVLCE EGTKHKLQKL QLNYPSDDVT FALKESPDLP WLSKYL

Best Arabidopsis Sequence Match ( AT4G14700.1 )
(BLAST)

001: MASSLSSKAK TFKSPTKTPT KMYRKSYLSP SSTSLTPPQT PETLTPLRRS SRHVSRKINL GNDPIDLPGK ESVEEINLIR KPRKRTNDIV VAEKSKKKKI
101: DPEVSFSPVS PIRSETKKTK KKKRVYYNKV EFDETEFEIG DDVYVKRTED ANPDEEEEED PEIEDCQICF KSHTNTIMIE CDDCLGGFHL NCLKPPLKEV
201: PEGDWICQFC EVKKSGQTLV VVPKPPEGKK LARTMKEKLL SSDLWAARIE KLWKEVDDGV YWIRARWYMI PEETVLGRQR HNLKRELYLT NDFADIEMEC
301: VLRHCFVKCP KEFSKASNDG DDVFLCEYEY DVHWGSFKRV AELADGDEDS DQEWNGRKEE EIDYSDEEIE FDDEESVRGV SKSKRGGANS RKGRFFGLEK
401: VGMKRIPEHV RCHKQSELEK AKATLLLATR PKSLPCRSKE MEEITAFIKG SISDDQCLGR CMYIHGVPGT GKTISVLSVM KNLKAEVEAG SVSPYCFVEI
501: NGLKLASPEN IYSVIYEGLS GHRVGWKKAL QSLNERFAEG KKIGKENEKP CILLIDELDV LVTRNQSVLY NILDWPTKPN SKLVVLGIAN TMDLPEKLLP
601: RISSRMGIQR LCFGPYNHRQ LQEIISTRLE GINAFEKTAI EFASRKVAAI SGDARRALEI CRRAAEVADY RLKKSNISAK SQLVIMADVE VAIQEMFQAP
701: HIQVMKSVSK LSRIFLTAMV HELYKTGMAE TSFDRVATTV SSICLTNGEA FPGWDILLKI GCDLGECRIV LCEPGEKHRL QKLQLNFPSD DVAFALKDNK
801: DLPWLANYL

Arabidopsis Description

ORC1AOrigin of replication complex subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q710E8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.