Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G12620.1 | Thale cress | plastid | 80.22 | 79.83 |
| CDY16697 | Canola | plastid | 79.48 | 79.48 |
| Bra029471.1-P | Field mustard | plastid | 79.23 | 78.84 |
| CDY62377 | Canola | plastid | 79.23 | 78.55 |
| PGSC0003DMT400033355 | Potato | cytosol | 8.16 | 72.53 |
| VIT_06s0004g00530.t01 | Wine grape | cytosol | 53.52 | 67.03 |
| Solyc03g006420.2.1 | Tomato | nucleus | 64.03 | 62.33 |
| KRH23133 | Soybean | nucleus | 64.28 | 61.1 |
| KRH10202 | Soybean | nucleus | 64.4 | 61.01 |
| PGSC0003DMT400033353 | Potato | nucleus, plastid | 55.25 | 59.76 |
| GSMUA_Achr8P31340_001 | Banana | nucleus | 58.34 | 59.0 |
| OQU75979 | Sorghum | plastid | 57.6 | 57.53 |
| VIT_06s0004g02050.t01 | Wine grape | nucleus | 63.91 | 56.94 |
| TraesCS7D01G153500.1 | Wheat | plastid | 56.86 | 55.49 |
| Zm00001d045080_P001 | Maize | plastid | 55.75 | 55.13 |
| TraesCS7A01G151700.1 | Wheat | plastid | 53.03 | 54.79 |
| TraesCS7B01G055600.1 | Wheat | nucleus | 56.98 | 52.03 |
| Zm00001d037086_P006 | Maize | nucleus, plastid | 56.61 | 51.75 |
| VIT_13s0175g00030.t01 | Wine grape | extracellular | 10.01 | 51.59 |
| HORVU7Hr1G031190.2 | Barley | nucleus | 56.49 | 48.31 |
| HORVU3Hr1G033880.2 | Barley | plastid | 10.26 | 31.92 |
| AT1G07270.1 | Thale cress | plastid | 12.61 | 20.2 |
| AT2G29680.1 | Thale cress | plastid | 12.61 | 18.92 |
Protein Annotations
| Gene3D:1.10.8.1280 | MapMan:13.2.1.1.1 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | EntrezGene:827121 | InterPro:AAA+_ATPase |
| ProteinID:AEE83478.1 | EMBL:AF277982 | EMBL:AJ421410 | ArrayExpress:AT4G14700 | EnsemblPlantsGene:AT4G14700 | RefSeq:AT4G14700 |
| TAIR:AT4G14700 | RefSeq:AT4G14700-TAIR-G | EnsemblPlants:AT4G14700.1 | TAIR:AT4G14700.1 | Symbol:ATORC1A | InterPro:ATPase_AAA_core |
| Unigene:At.25357 | InterPro:BAH_dom | ProteinID:CAB10249.1 | ProteinID:CAB78512.1 | GO:GO:0000166 | GO:GO:0000808 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006260 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010385 | GO:GO:0046872 | InterPro:IPR001025 | InterPro:IPR013083 |
| InterPro:IPR019787 | RefSeq:NP_567440.1 | InterPro:ORC1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00628 |
| PFAM:PF01426 | PO:PO:0000012 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020148 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51038 | PANTHER:PTHR10763 |
| PANTHER:PTHR10763:SF23 | UniProt:Q710E8 | SMART:SM00249 | SMART:SM00382 | SMART:SM00439 | SUPFAM:SSF52540 |
| SUPFAM:SSF57903 | UniParc:UPI0000162A3D | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
ORC1AOrigin of replication complex subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q710E8]
Coordinates
chr4:+:8422173..8424760
Molecular Weight (calculated)
91900.4 Da
IEP (calculated)
7.508
GRAVY (calculated)
-0.500
Length
809 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLSSKAK TFKSPTKTPT KMYRKSYLSP SSTSLTPPQT PETLTPLRRS SRHVSRKINL GNDPIDLPGK ESVEEINLIR KPRKRTNDIV VAEKSKKKKI
101: DPEVSFSPVS PIRSETKKTK KKKRVYYNKV EFDETEFEIG DDVYVKRTED ANPDEEEEED PEIEDCQICF KSHTNTIMIE CDDCLGGFHL NCLKPPLKEV
201: PEGDWICQFC EVKKSGQTLV VVPKPPEGKK LARTMKEKLL SSDLWAARIE KLWKEVDDGV YWIRARWYMI PEETVLGRQR HNLKRELYLT NDFADIEMEC
301: VLRHCFVKCP KEFSKASNDG DDVFLCEYEY DVHWGSFKRV AELADGDEDS DQEWNGRKEE EIDYSDEEIE FDDEESVRGV SKSKRGGANS RKGRFFGLEK
401: VGMKRIPEHV RCHKQSELEK AKATLLLATR PKSLPCRSKE MEEITAFIKG SISDDQCLGR CMYIHGVPGT GKTISVLSVM KNLKAEVEAG SVSPYCFVEI
501: NGLKLASPEN IYSVIYEGLS GHRVGWKKAL QSLNERFAEG KKIGKENEKP CILLIDELDV LVTRNQSVLY NILDWPTKPN SKLVVLGIAN TMDLPEKLLP
601: RISSRMGIQR LCFGPYNHRQ LQEIISTRLE GINAFEKTAI EFASRKVAAI SGDARRALEI CRRAAEVADY RLKKSNISAK SQLVIMADVE VAIQEMFQAP
701: HIQVMKSVSK LSRIFLTAMV HELYKTGMAE TSFDRVATTV SSICLTNGEA FPGWDILLKI GCDLGECRIV LCEPGEKHRL QKLQLNFPSD DVAFALKDNK
801: DLPWLANYL
101: DPEVSFSPVS PIRSETKKTK KKKRVYYNKV EFDETEFEIG DDVYVKRTED ANPDEEEEED PEIEDCQICF KSHTNTIMIE CDDCLGGFHL NCLKPPLKEV
201: PEGDWICQFC EVKKSGQTLV VVPKPPEGKK LARTMKEKLL SSDLWAARIE KLWKEVDDGV YWIRARWYMI PEETVLGRQR HNLKRELYLT NDFADIEMEC
301: VLRHCFVKCP KEFSKASNDG DDVFLCEYEY DVHWGSFKRV AELADGDEDS DQEWNGRKEE EIDYSDEEIE FDDEESVRGV SKSKRGGANS RKGRFFGLEK
401: VGMKRIPEHV RCHKQSELEK AKATLLLATR PKSLPCRSKE MEEITAFIKG SISDDQCLGR CMYIHGVPGT GKTISVLSVM KNLKAEVEAG SVSPYCFVEI
501: NGLKLASPEN IYSVIYEGLS GHRVGWKKAL QSLNERFAEG KKIGKENEKP CILLIDELDV LVTRNQSVLY NILDWPTKPN SKLVVLGIAN TMDLPEKLLP
601: RISSRMGIQR LCFGPYNHRQ LQEIISTRLE GINAFEKTAI EFASRKVAAI SGDARRALEI CRRAAEVADY RLKKSNISAK SQLVIMADVE VAIQEMFQAP
701: HIQVMKSVSK LSRIFLTAMV HELYKTGMAE TSFDRVATTV SSICLTNGEA FPGWDILLKI GCDLGECRIV LCEPGEKHRL QKLQLNFPSD DVAFALKDNK
801: DLPWLANYL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.