Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95747 | Canola | plastid | 73.65 | 74.48 |
| CDY02004 | Canola | nucleus, plastid | 68.09 | 73.55 |
| AT1G07270.1 | Thale cress | plastid | 64.75 | 69.11 |
| CDY71310 | Canola | cytosol | 19.85 | 67.72 |
| CDX94733 | Canola | cytosol | 16.51 | 60.96 |
| KRG98340 | Soybean | mitochondrion, plastid | 51.76 | 58.86 |
| KRH46438 | Soybean | plastid | 51.39 | 58.69 |
| VIT_06s0004g06300.t01 | Wine grape | plastid | 53.06 | 56.75 |
| TraesCS3B01G400900.1 | Wheat | plastid | 43.23 | 52.95 |
| PGSC0003DMT400078033 | Potato | cytosol | 52.32 | 52.81 |
| Solyc06g076860.2.1 | Tomato | nucleus | 51.76 | 52.44 |
| GSMUA_Achr6P33780_001 | Banana | nucleus | 46.2 | 50.51 |
| HORVU3Hr1G084800.19 | Barley | plastid | 43.04 | 49.79 |
| EES01777 | Sorghum | plastid | 44.9 | 49.19 |
| Zm00001d012320_P002 | Maize | plastid | 44.34 | 48.78 |
| TraesCS3D01G362000.1 | Wheat | plastid | 44.9 | 48.5 |
| TraesCS3A01G369000.1 | Wheat | plastid | 44.71 | 48.3 |
| Zm00001d042810_P001 | Maize | plastid | 43.6 | 48.06 |
| Os01t0856000-02 | Rice | nucleus, plastid | 45.08 | 47.18 |
| AT4G12620.1 | Thale cress | plastid | 19.11 | 12.67 |
| AT4G14700.1 | Thale cress | plastid | 18.92 | 12.61 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.8.60 | MapMan:13.2.1.4 | Gene3D:3.40.50.300 | EntrezGene:817518 | InterPro:AAA+_ATPase |
| ProteinID:AAC35241.2 | ProteinID:AEC08292.1 | ProteinID:AEC08293.1 | EMBL:AF275940 | EMBL:AJ271606 | EMBL:AJ293020 |
| ArrayExpress:AT2G29680 | EnsemblPlantsGene:AT2G29680 | RefSeq:AT2G29680 | TAIR:AT2G29680 | RefSeq:AT2G29680-TAIR-G | EnsemblPlants:AT2G29680.1 |
| TAIR:AT2G29680.1 | Symbol:CDC6 | InterPro:Cdc6/18 | InterPro:Cdc6_C | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006260 | GO:GO:0006270 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042023 | GO:GO:0051301 |
| InterPro:IPR036388 | RefSeq:NP_565686.1 | RefSeq:NP_850137.1 | UniProt:O82387 | InterPro:P-loop_NTPase | PFAM:PF09079 |
| PFAM:PF13401 | PIRSF:PIRSF001767 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10763 | PANTHER:PTHR10763:SF26 | SMART:SM01074 |
| SUPFAM:SSF46785 | SUPFAM:SSF52540 | UniParc:UPI00000A4BFD | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
CDC6Cell division control protein 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:O82387]
Coordinates
chr2:+:12689581..12692872
Molecular Weight (calculated)
59844.2 Da
IEP (calculated)
9.447
GRAVY (calculated)
-0.139
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAIAGPSSS PQKHVVGSRS ESIGGVRSAE VNTSRKRKLI SDSAAEVSAT VVLPVNSIST PMKWKSPRRC AVSIPKTSDE EIKEDSNEKL ENPVISVCLE
101: VKSKWNPKDD EQMKAVKEAL HVSKAPSTVV CREDEQRRVF EFVKGCMEQK KAGSLYICGC PGTGKSLSME KVRLQAEEWA KQAGLHCPET VSVNCTSLTK
201: STDIFSKILG NYESGKKANG SFSPLQQLQR LFSQKQQQSR SKMMLIIADE MDYLITRDRG VLHELFMLTT LPLSRCILIG TVFCVINVHF LKSVSYGQTS
301: FKFKVRICPP GVANAIDLAD RFLPKLKSLN CKPLVVTFRA YSKDQILRIL QERLVALPFV AFQSNALEIC ARKVSAASGD MRKALCVCRS ALEILEIEVR
401: GSIDQEPKGP VPECQVVKMD HMIAALSKTF KSPIVDTIQS LPQHQQIIVC SAAKAFRGSK KDRTIAELNK LYLEICKSSM ITPAGITEFS NMCTVLNDQG
501: ILKLSLARDD KLKRVSLRVD EADITFALKE IRFFRNCLL
101: VKSKWNPKDD EQMKAVKEAL HVSKAPSTVV CREDEQRRVF EFVKGCMEQK KAGSLYICGC PGTGKSLSME KVRLQAEEWA KQAGLHCPET VSVNCTSLTK
201: STDIFSKILG NYESGKKANG SFSPLQQLQR LFSQKQQQSR SKMMLIIADE MDYLITRDRG VLHELFMLTT LPLSRCILIG TVFCVINVHF LKSVSYGQTS
301: FKFKVRICPP GVANAIDLAD RFLPKLKSLN CKPLVVTFRA YSKDQILRIL QERLVALPFV AFQSNALEIC ARKVSAASGD MRKALCVCRS ALEILEIEVR
401: GSIDQEPKGP VPECQVVKMD HMIAALSKTF KSPIVDTIQS LPQHQQIIVC SAAKAFRGSK KDRTIAELNK LYLEICKSSM ITPAGITEFS NMCTVLNDQG
501: ILKLSLARDD KLKRVSLRVD EADITFALKE IRFFRNCLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.