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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G29680.1 TraesCS1B01G300800.1 AT1G07660.1 20706207
AT2G29680.1 TraesCS2B01G492300.1 AT1G07660.1 20706207
AT2G29680.1 TraesCS3A01G133900.1 AT1G07660.1 20706207
AT2G29680.1 TraesCS6A01G061600.1 AT1G07660.1 20706207
AT2G29680.1 TraesCS6B01G072500.1 AT1G07660.1 20706207
AT2G29680.1 TraesCS6D01G063300.1 AT1G07660.1 20706207
AT2G29680.1 TraesCSU01G027600.1 AT1G07660.1 20706207
AT2G29680.1 TraesCS1A01G291700.1 AT1G07820.1 20706207
AT2G29680.1 TraesCS1D01G262000.1 AT1G07820.1 20706207
AT2G29680.1 TraesCS3D01G150200.1 AT1G07820.1 20706207
AT2G29680.1 TraesCS4B01G225000.1 AT1G07820.1 20706207
AT2G29680.1 TraesCS5B01G356200.1 AT1G07820.1 20706207
AT2G29680.1 TraesCS2A01G037800.2 AT2G02560.1 20706207
AT2G29680.1 TraesCS2B01G051000.1 AT2G02560.1 20706207
AT2G29680.1 TraesCS2D01G036800.1 AT2G02560.1 20706207
AT2G29680.1 TraesCS5A01G046900.1 AT2G02560.1 20706207
AT2G29680.1 TraesCS5A01G409300.1 AT2G02560.1 20706207
AT2G29680.1 TraesCS5B01G051900.1 AT2G02560.1 20706207
AT2G29680.1 TraesCS5D01G057500.1 AT2G02560.1 20706207
AT2G29680.1 TraesCS5D01G419100.1 AT2G02560.1 20706207
AT2G29680.1 TraesCS1A01G262000.1 AT2G28740.1 20706207
AT2G29680.1 TraesCS4D01G345400.1 AT2G28740.1 20706207
AT2G29680.1 TraesCS6A01G260700.1 AT2G28740.1 20706207
AT2G29680.1 TraesCS6B01G078600.1 AT2G28740.1 20706207
AT2G29680.1 TraesCS5D01G354100.1 AT3G45930.1 20706207
AT2G29680.1 TraesCS6B01G081600.1 AT3G45930.1 20706207
AT2G29680.1 TraesCS1A01G295400.1 AT3G46320.1 20706207
AT2G29680.1 TraesCS1B01G297200.1 AT3G46320.1 20706207
AT2G29680.1 TraesCS2B01G492400.1 AT3G46320.1 20706207
AT2G29680.1 TraesCS6D01G061700.1 AT3G46320.1 20706207
AT2G29680.1 TraesCS1A01G201300.1 AT3G53730.1 20706207
AT2G29680.1 TraesCS1B01G221600.1 AT3G53730.1 20706207
AT2G29680.1 TraesCS1D01G286700.1 AT3G53730.1 20706207
AT2G29680.1 TraesCS1D01G290000.1 AT3G53730.1 20706207
AT2G29680.1 TraesCS2D01G413300.1 AT3G53730.1 20706207
AT2G29680.1 TraesCS7A01G178900.1 AT3G53730.1 20706207
AT2G29680.1 TraesCSU01G121000.1 AT3G53730.1 20706207
AT2G29680.1 TraesCSU01G142200.1 AT3G53730.1 20706207
AT2G29680.1 TraesCS1A01G291600.1 AT5G59690.1 20706207
AT2G29680.1 TraesCS4B01G350700.1 AT5G59690.1 20706207
AT2G29680.1 TraesCS6A01G055400.1 AT5G59690.1 20706207
AT2G29680.1 TraesCS6A01G063100.1 AT5G59690.1 20706207
AT2G29680.1 TraesCS6D01G062100.1 AT5G59690.1 20706207
AT2G29680.1 TraesCS1A01G295400.1 AT5G59970.1 20706207
AT2G29680.1 TraesCS1B01G297200.1 AT5G59970.1 20706207
AT2G29680.1 TraesCS2B01G492400.1 AT5G59970.1 20706207
AT2G29680.1 TraesCS6D01G061700.1 AT5G59970.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G369000.1 Wheat plastid 98.0 98.0
TraesCS3B01G400900.1 Wheat plastid 82.97 94.09
HORVU3Hr1G084800.19 Barley plastid 83.77 89.7
Zm00001d012320_P002 Maize plastid 75.15 76.53
EES01777 Sorghum plastid 74.15 75.2
Zm00001d042810_P001 Maize plastid 72.75 74.23
Os01t0856000-02 Rice nucleus, plastid 76.15 73.79
GSMUA_Achr6P33780_001 Banana nucleus 52.3 52.94
KRH46438 Soybean plastid 47.29 50.0
KRG98340 Soybean mitochondrion, plastid 46.89 49.37
AT1G07270.1 Thale cress plastid 49.7 49.11
CDY02004 Canola nucleus, plastid 48.7 48.7
CDY06693 Canola nucleus 46.69 48.44
VIT_06s0004g06300.t01 Wine grape plastid 47.7 47.22
PGSC0003DMT400078033 Potato cytosol 49.9 46.63
Solyc06g076860.2.1 Tomato nucleus 49.7 46.62
Bra015569.1-P Field mustard nucleus 45.89 46.36
CDY10263 Canola plastid 47.09 46.26
AT2G29680.1 Thale cress plastid 48.5 44.9
CDX95747 Canola plastid 47.9 44.84
CDY71310 Canola cytosol 13.43 42.41
CDX94733 Canola cytosol 12.22 41.78
TraesCS7D01G153500.1 Wheat plastid 22.65 13.63
Protein Annotations
Gene3D:1.10.10.10Gene3D:1.10.8.60MapMan:13.2.1.4Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:Cdc6/18
InterPro:Cdc6_CGO:GO:0006139GO:GO:0006259GO:GO:0006270GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0051301InterPro:IPR036388InterPro:P-loop_NTPasePFAM:PF09079
PFAM:PF13401PIRSF:PIRSF001767PANTHER:PTHR10763PANTHER:PTHR10763:SF26SMART:SM01074SUPFAM:SSF46785
SUPFAM:SSF52540EnsemblPlantsGene:TraesCS3D01G362000EnsemblPlants:TraesCS3D01G362000.1InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfTIGR:cd00009
TIGR:cd08768SEG:seg::::
Description
No Description!
Coordinates
chr3D:+:476195692..476199492
Molecular Weight (calculated)
55006.8 Da
IEP (calculated)
9.444
GRAVY (calculated)
-0.206
Length
499 amino acids
Sequence
(BLAST)
001: MPTLRSATLS PAPAATPSPT AVTPSPAAAG TTPSSAAKRR MTARRAADSP DSPQFASPHK SPLAGSGHFG APKMLSGSPK SSRKRLYGDL VPAERPKWNP
101: RDPAQMQAVK EALHVATTPS CGLVCRDDEQ RRVFEFCKAC VQQERAGSLY VCGCPGTGKT LSISKVKQSV SRWADEMGME TPDDLSINCT NLGNTSDIFG
201: KILEKFQVRK KASGKLSPLQ QLQRMFSHKE SAPRRMLLVV VDEMDYLITR DRAVLHDLFM LTTLQFSRCI LIGIANAVDL ADRFLPKLES LNCKPLVITF
301: RAYSKDQISN IINHRLKVLE YDVFEPMAIE FCARKVAAAT GDMRKALGVC RSAVEIFESG LQDSSDKGAG VVTFDHMDIA LSKVFKPAVV NNILCLPQHQ
401: QMVLCALANT FQHSRKKATT LGELNKSYIE ICRSTQVPAV GMLEFSNMCM ILSDQGYLKL GQSKEDKLRR VTLQIDISDI TFAFKGSRFF EKCLEQPKF
Best Arabidopsis Sequence Match ( AT1G07270.1 )
(BLAST)
001: MPTNAGTSLS SYKHIVAIGT TVKSESLESA AYEIPRKRKM RSDSAAVSGN SVSTPKKLKS HLPSSVPNPG MSEKEVVEDS NEILRYPVNL AVSDCLGTKS
101: KWSPRDEEQM RAVKEALHVS KAPSTILCRE DEQIRIFEFV KGCIDQQKAG SLYICGCPGT GKSLSMEKVV QQVGDWSTQA GLPPVDTLSV NCTSLSKTTD
201: IFSKILGEIK PGKNANTNSS PLQHLQNLFS QKQESSSSRM MLIIADEMDY LITKDRGVLY DLFMLTTLPF SRCILIGVAN AIDLADRFLP KLKSLNCKPM
301: VITFRAYSKD QILRILQERL RVLSYVAFQP KALELCARKV AAASGDMRKA LCVCRSALEI LEIETRGSTG PESQGPTPDD SVVRMDHMAA ALSKTFKSPV
401: VETIQSLPQH QQIIICAAAK AFRGSKKDAT VGELNKLYLE ICKSWMISPA GITEFTNMCT VLNDQGILKV GQARRDKLKR VSLRVDESDI TFALQEIRFF
501: RNCLL
Arabidopsis Description
CDC6BCell division control protein 6 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8W032]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.