Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G14700.1 | Thale cress | plastid | 79.83 | 80.22 |
| CDY16697 | Canola | plastid | 73.31 | 73.67 |
| PGSC0003DMT400033355 | Potato | cytosol | 8.24 | 73.63 |
| CDY62377 | Canola | plastid | 73.55 | 73.28 |
| Bra029471.1-P | Field mustard | plastid | 73.06 | 73.06 |
| VIT_06s0004g00530.t01 | Wine grape | cytosol | 53.01 | 66.72 |
| Solyc03g006420.2.1 | Tomato | nucleus | 61.75 | 60.41 |
| KRH23133 | Soybean | nucleus | 63.1 | 60.28 |
| KRH10202 | Soybean | nucleus | 62.85 | 59.84 |
| GSMUA_Achr8P31340_001 | Banana | nucleus | 57.32 | 58.25 |
| PGSC0003DMT400033353 | Potato | nucleus, plastid | 52.64 | 57.22 |
| OQU75979 | Sorghum | plastid | 56.09 | 56.3 |
| VIT_06s0004g02050.t01 | Wine grape | nucleus | 62.61 | 56.06 |
| TraesCS7D01G153500.1 | Wheat | plastid | 55.84 | 54.76 |
| TraesCS7A01G151700.1 | Wheat | plastid | 52.28 | 54.28 |
| VIT_13s0175g00030.t01 | Wine grape | extracellular | 10.46 | 54.14 |
| Zm00001d045080_P001 | Maize | plastid | 54.24 | 53.91 |
| TraesCS7B01G055600.1 | Wheat | nucleus | 56.33 | 51.69 |
| Zm00001d037086_P006 | Maize | nucleus, plastid | 55.35 | 50.85 |
| HORVU7Hr1G031190.2 | Barley | nucleus | 55.47 | 47.67 |
| HORVU3Hr1G033880.2 | Barley | plastid | 9.96 | 31.15 |
| AT1G07270.1 | Thale cress | plastid | 12.55 | 20.2 |
| AT2G29680.1 | Thale cress | plastid | 12.67 | 19.11 |
Protein Annotations
| Gene3D:1.10.8.1280 | MapMan:13.2.1.1.1 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | PDB:5HH7 | EntrezGene:826875 |
| UniProt:A0A178UTR9 | InterPro:AAA+_ATPase | ProteinID:AEE83158.1 | EMBL:AJ426477 | ArrayExpress:AT4G12620 | EnsemblPlantsGene:AT4G12620 |
| RefSeq:AT4G12620 | TAIR:AT4G12620 | RefSeq:AT4G12620-TAIR-G | EnsemblPlants:AT4G12620.1 | TAIR:AT4G12620.1 | InterPro:ATPase_AAA_core |
| Unigene:At.48852 | InterPro:BAH_dom | ProteinID:CAB53755.1 | ProteinID:CAB78305.1 | GO:GO:0000003 | GO:GO:0000166 |
| GO:GO:0000808 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009567 | GO:GO:0009987 | GO:GO:0010385 | GO:GO:0046872 |
| InterPro:IPR001025 | InterPro:IPR013083 | InterPro:IPR019787 | RefSeq:NP_192999.1 | ProteinID:OAO96554.1 | InterPro:ORC1 |
| Symbol:ORC1B | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00628 | PFAM:PF01426 | PO:PO:0000012 |
| PO:PO:0000293 | PO:PO:0004010 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020148 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51038 | PANTHER:PTHR10763 |
| PANTHER:PTHR10763:SF23 | UniProt:Q9SU24 | SMART:SM00249 | SMART:SM00382 | SMART:SM00439 | SUPFAM:SSF52540 |
| SUPFAM:SSF57903 | UniParc:UPI00000A52D7 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
ORC1BUNE13 [Source:UniProtKB/TrEMBL;Acc:A0A178UTR9]
Coordinates
chr4:-:7459609..7462447
Molecular Weight (calculated)
92174.5 Da
IEP (calculated)
7.519
GRAVY (calculated)
-0.565
Length
813 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTPRAKTF KSPTKTPSNI YRKSYLSPSS TSHTPQTPET HTPLRRSARH VSRKIDLGND PIDAPGNDPI EGMNLIRKRE RAPRKPTTDV VPSKSKKTET
101: PKKKKKIDSF TPVSPIRSET IKKTKKKKRV YYNKVEFDET EFEIGDDVYV KRREDSNSDE EEDPEIEDCQ ICFKSDTNIM IECDDCLGGF HLKCLKPPLK
201: EVPEGDWICQ FCEVKKSGQS QTLDLPKPPE GKKLARTMRE KLLSGDLWAA RIDKLWKEVD DGVYWIRARW YMIPEETVSG RQPHNLKREL YLTNDFADIE
301: MECILRHCSV KCPKEFSKAS NDGDDVFLCE YEYDVHWRSF KRLAELADGD SDSDQEWNGR KEEEVDDSDE EMELDDEVLK SKRGGLTSAR GGANSRKGRF
401: FGVEKVGMKL IPEHVRCHKQ SELEKAKATL LLATRPKSLP CRSKEMEEIT SFIKGSISDD QCLGRCMYIH GVPGTGKTIS VLSVMKNLKA EVEEGSVSPY
501: CFVEINGLKL ASPENIYSVI YEALSGHRVG WKKALQCLNE RFAEGKRIGK EDEKPCILLI DELDLLVTRN QSVLYNILDW PTKPNSKLVV LGIANTMDLP
601: EKLLPRISSR MGIQRLCFGP YNHTQLQEII STRLNGIDAF EKTAIEFASR KVAAISGDAR RALEICRRAA EVADHRLNTN KSAKNQLVIM ADVEAAIQEM
701: FQAPHIQVMK SVSKLSKIFL TAMVHELYKT GMAETTFDRV ATTVSSICLT NGEAFPGWDI LLKIGCDLGE CRIILCEPGE KHRLQKLQLN FPSDDVAFAL
801: KDNKDLPWLA NYL
101: PKKKKKIDSF TPVSPIRSET IKKTKKKKRV YYNKVEFDET EFEIGDDVYV KRREDSNSDE EEDPEIEDCQ ICFKSDTNIM IECDDCLGGF HLKCLKPPLK
201: EVPEGDWICQ FCEVKKSGQS QTLDLPKPPE GKKLARTMRE KLLSGDLWAA RIDKLWKEVD DGVYWIRARW YMIPEETVSG RQPHNLKREL YLTNDFADIE
301: MECILRHCSV KCPKEFSKAS NDGDDVFLCE YEYDVHWRSF KRLAELADGD SDSDQEWNGR KEEEVDDSDE EMELDDEVLK SKRGGLTSAR GGANSRKGRF
401: FGVEKVGMKL IPEHVRCHKQ SELEKAKATL LLATRPKSLP CRSKEMEEIT SFIKGSISDD QCLGRCMYIH GVPGTGKTIS VLSVMKNLKA EVEEGSVSPY
501: CFVEINGLKL ASPENIYSVI YEALSGHRVG WKKALQCLNE RFAEGKRIGK EDEKPCILLI DELDLLVTRN QSVLYNILDW PTKPNSKLVV LGIANTMDLP
601: EKLLPRISSR MGIQRLCFGP YNHTQLQEII STRLNGIDAF EKTAIEFASR KVAAISGDAR RALEICRRAA EVADHRLNTN KSAKNQLVIM ADVEAAIQEM
701: FQAPHIQVMK SVSKLSKIFL TAMVHELYKT GMAETTFDRV ATTVSSICLT NGEAFPGWDI LLKIGCDLGE CRIILCEPGE KHRLQKLQLN FPSDDVAFAL
801: KDNKDLPWLA NYL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.