Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G151700.1 | Wheat | plastid | 86.23 | 97.57 |
| TraesCS7D01G153500.1 | Wheat | plastid | 90.18 | 96.38 |
| OQU75979 | Sorghum | plastid | 75.96 | 83.09 |
| HORVU7Hr1G031190.2 | Barley | nucleus | 86.34 | 80.87 |
| Zm00001d045080_P001 | Maize | plastid | 73.7 | 79.83 |
| Zm00001d037086_P006 | Maize | nucleus, plastid | 73.36 | 73.45 |
| VIT_06s0004g00530.t01 | Wine grape | cytosol | 46.28 | 63.47 |
| GSMUA_Achr8P31340_001 | Banana | nucleus | 57.0 | 63.12 |
| PGSC0003DMT400033355 | Potato | cytosol | 6.43 | 62.64 |
| KRH23133 | Soybean | nucleus | 56.09 | 58.4 |
| Solyc03g006420.2.1 | Tomato | nucleus | 54.51 | 58.12 |
| AT4G14700.1 | Thale cress | plastid | 52.03 | 56.98 |
| KRH10202 | Soybean | nucleus | 54.63 | 56.67 |
| PGSC0003DMT400033353 | Potato | nucleus, plastid | 47.74 | 56.55 |
| CDY16697 | Canola | plastid | 51.58 | 56.49 |
| Bra029471.1-P | Field mustard | plastid | 51.69 | 56.33 |
| AT4G12620.1 | Thale cress | plastid | 51.69 | 56.33 |
| CDY62377 | Canola | plastid | 51.81 | 56.25 |
| VIT_06s0004g02050.t01 | Wine grape | nucleus | 54.74 | 53.41 |
| VIT_13s0175g00030.t01 | Wine grape | extracellular | 7.45 | 42.04 |
| TraesCS3B01G400900.1 | Wheat | plastid | 11.74 | 23.64 |
Protein Annotations
| Gene3D:1.10.8.1280 | MapMan:13.2.1.1.1 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:BAH_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:IPR001025 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:ORC1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF00628 | PFAM:PF01426 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51038 | PANTHER:PTHR10763 |
| PANTHER:PTHR10763:SF23 | SMART:SM00249 | SMART:SM00382 | SMART:SM00439 | SUPFAM:SSF52540 | SUPFAM:SSF57903 |
| EnsemblPlantsGene:TraesCS7B01G055600 | EnsemblPlants:TraesCS7B01G055600.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | TIGR:cd00009 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7B:+:59052936..59059447
Molecular Weight (calculated)
99553.0 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.566
Length
886 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLLYTGSFT TAAPLTDQTE TPIRPISFPT TPPNPNPLPP VSNLQIVSVT VASPPLPSGE MDLSATPTKS KSKSKPGPSP SKVAAAAAQM DFSTPSKPAP
101: TPTPRRKSKP VPYAPPASPA TPSAVRRSRR LLDTPTKDLS EAALFETPAK PKPKPTLKRK RASPSPSPKT PARSEPKPKR QRRPPAKRAF YRKVVYDGEE
201: FAAGDDVYVK RLEGAESDAD DPEEPEDCRV CFRAGGGVMV ECDACLGGFH LRCVRPPLRR VPEGDWACPY CEAEREGRAM DRPKPPVGKK IKRTAKEKLL
301: DSDLWAAHIE SLRREPDGAF WAKVRWYTIP EETAAGRQPH NLRRELYRTN ALGDIEMESI VRHCFVMSPK EYRDATNDGD DVFYCEYEYD VHWHNFKRLA
401: DIDDEPETKE DPSDEPYNAA NDYNSDTDED SEYDEEDEPA TRCSARKNQS NEKILPANSW KGRIYGLQKI GIRKIPEHVR CHQKTALEKA KATLLLATLP
501: KSLPCRDKEM EEISTFVKDA ICNDHCLGRC LYIHGVPGTG KTMSVLAVMR RLRSEFDSGA LRPYCFIEIN GLKLASPENI YKVIYEQLSG HRVGWKKALH
601: YLTEHFSDGK KIGKQANQPI VLLIDELDLL LTRNQSVLYN ILDWPTKPNS NLVIIGIANT MDLPEKLLPR ISSRMGIQRL CFGPYNYRQL QEIITSRLKG
701: INAFEDQAIE FASRKVAAMS GDARRALEIC RRAAEFADYR VKQFQQVEQT PSSANTGNGF VCMGDIEDAI QEVFQAPHIQ VMKNCPKFGK VILAAMVHEL
801: YRSGLGEVLF DKLATTVFSW CHVNRELLPG YDTLLKICCK LGESKIVLCE EGTKHKLQKL QLNYPSDDVT FALKESPDLP WLSKYL
101: TPTPRRKSKP VPYAPPASPA TPSAVRRSRR LLDTPTKDLS EAALFETPAK PKPKPTLKRK RASPSPSPKT PARSEPKPKR QRRPPAKRAF YRKVVYDGEE
201: FAAGDDVYVK RLEGAESDAD DPEEPEDCRV CFRAGGGVMV ECDACLGGFH LRCVRPPLRR VPEGDWACPY CEAEREGRAM DRPKPPVGKK IKRTAKEKLL
301: DSDLWAAHIE SLRREPDGAF WAKVRWYTIP EETAAGRQPH NLRRELYRTN ALGDIEMESI VRHCFVMSPK EYRDATNDGD DVFYCEYEYD VHWHNFKRLA
401: DIDDEPETKE DPSDEPYNAA NDYNSDTDED SEYDEEDEPA TRCSARKNQS NEKILPANSW KGRIYGLQKI GIRKIPEHVR CHQKTALEKA KATLLLATLP
501: KSLPCRDKEM EEISTFVKDA ICNDHCLGRC LYIHGVPGTG KTMSVLAVMR RLRSEFDSGA LRPYCFIEIN GLKLASPENI YKVIYEQLSG HRVGWKKALH
601: YLTEHFSDGK KIGKQANQPI VLLIDELDLL LTRNQSVLYN ILDWPTKPNS NLVIIGIANT MDLPEKLLPR ISSRMGIQRL CFGPYNYRQL QEIITSRLKG
701: INAFEDQAIE FASRKVAAMS GDARRALEIC RRAAEFADYR VKQFQQVEQT PSSANTGNGF VCMGDIEDAI QEVFQAPHIQ VMKNCPKFGK VILAAMVHEL
801: YRSGLGEVLF DKLATTVFSW CHVNRELLPG YDTLLKICCK LGESKIVLCE EGTKHKLQKL QLNYPSDDVT FALKESPDLP WLSKYL
001: MASSLSSKAK TFKSPTKTPT KMYRKSYLSP SSTSLTPPQT PETLTPLRRS SRHVSRKINL GNDPIDLPGK ESVEEINLIR KPRKRTNDIV VAEKSKKKKI
101: DPEVSFSPVS PIRSETKKTK KKKRVYYNKV EFDETEFEIG DDVYVKRTED ANPDEEEEED PEIEDCQICF KSHTNTIMIE CDDCLGGFHL NCLKPPLKEV
201: PEGDWICQFC EVKKSGQTLV VVPKPPEGKK LARTMKEKLL SSDLWAARIE KLWKEVDDGV YWIRARWYMI PEETVLGRQR HNLKRELYLT NDFADIEMEC
301: VLRHCFVKCP KEFSKASNDG DDVFLCEYEY DVHWGSFKRV AELADGDEDS DQEWNGRKEE EIDYSDEEIE FDDEESVRGV SKSKRGGANS RKGRFFGLEK
401: VGMKRIPEHV RCHKQSELEK AKATLLLATR PKSLPCRSKE MEEITAFIKG SISDDQCLGR CMYIHGVPGT GKTISVLSVM KNLKAEVEAG SVSPYCFVEI
501: NGLKLASPEN IYSVIYEGLS GHRVGWKKAL QSLNERFAEG KKIGKENEKP CILLIDELDV LVTRNQSVLY NILDWPTKPN SKLVVLGIAN TMDLPEKLLP
601: RISSRMGIQR LCFGPYNHRQ LQEIISTRLE GINAFEKTAI EFASRKVAAI SGDARRALEI CRRAAEVADY RLKKSNISAK SQLVIMADVE VAIQEMFQAP
701: HIQVMKSVSK LSRIFLTAMV HELYKTGMAE TSFDRVATTV SSICLTNGEA FPGWDILLKI GCDLGECRIV LCEPGEKHRL QKLQLNFPSD DVAFALKDNK
801: DLPWLANYL
101: DPEVSFSPVS PIRSETKKTK KKKRVYYNKV EFDETEFEIG DDVYVKRTED ANPDEEEEED PEIEDCQICF KSHTNTIMIE CDDCLGGFHL NCLKPPLKEV
201: PEGDWICQFC EVKKSGQTLV VVPKPPEGKK LARTMKEKLL SSDLWAARIE KLWKEVDDGV YWIRARWYMI PEETVLGRQR HNLKRELYLT NDFADIEMEC
301: VLRHCFVKCP KEFSKASNDG DDVFLCEYEY DVHWGSFKRV AELADGDEDS DQEWNGRKEE EIDYSDEEIE FDDEESVRGV SKSKRGGANS RKGRFFGLEK
401: VGMKRIPEHV RCHKQSELEK AKATLLLATR PKSLPCRSKE MEEITAFIKG SISDDQCLGR CMYIHGVPGT GKTISVLSVM KNLKAEVEAG SVSPYCFVEI
501: NGLKLASPEN IYSVIYEGLS GHRVGWKKAL QSLNERFAEG KKIGKENEKP CILLIDELDV LVTRNQSVLY NILDWPTKPN SKLVVLGIAN TMDLPEKLLP
601: RISSRMGIQR LCFGPYNHRQ LQEIISTRLE GINAFEKTAI EFASRKVAAI SGDARRALEI CRRAAEVADY RLKKSNISAK SQLVIMADVE VAIQEMFQAP
701: HIQVMKSVSK LSRIFLTAMV HELYKTGMAE TSFDRVATTV SSICLTNGEA FPGWDILLKI GCDLGECRIV LCEPGEKHRL QKLQLNFPSD DVAFALKDNK
801: DLPWLANYL
Arabidopsis Description
ORC1AOrigin of replication complex subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q710E8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.