Factsheet for HORVU3Hr1G033880.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G062160.1
HORVU2Hr1G003370.11
HORVU2Hr1G028500.1
HORVU2Hr1G029330.11
HORVU2Hr1G060120.1
HORVU3Hr1G095800.1
HORVU4Hr1G047140.6
HORVU5Hr1G008340.2
HORVU5Hr1G093160.3
HORVU5Hr1G103400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12620.1	HORVU2Hr1G028500.1	AT1G26840.1	16179646
AT4G12620.1	HORVU1Hr1G062160.1	AT5G13060.1	18818695
AT4G14700.1	HORVU2Hr1G060120.1	AT1G30210.1	18818695
AT4G14700.1	HORVU5Hr1G008340.2	AT1G30210.1	18818695
AT4G14700.1	HORVU5Hr1G103400.1	AT1G30210.1	18818695
AT4G14700.1	HORVU3Hr1G095800.1	AT3G04620.1	20706207
AT4G14700.1	HORVU2Hr1G003370.11	AT3G54710.1	18818695
AT4G14700.1	HORVU4Hr1G047140.6	AT3G54710.1	18818695
AT4G14700.1	HORVU5Hr1G093160.3	AT4G16630.1	20706207
AT4G14700.1	HORVU1Hr1G062160.1	AT5G13060.1	18818695
AT4G14700.1	HORVU2Hr1G029330.11	AT5G16690.1	18818695

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G031190.2	Barley	nucleus	83.08	22.83
PGSC0003DMT400033353	Potato	nucleus, plastid	35.0	12.17
GSMUA_Achr8P31340_001	Banana	nucleus	35.77	11.62
Solyc03g006420.2.1	Tomato	nucleus	35.0	10.95
KRH10202	Soybean	nucleus	35.77	10.89
KRH23133	Soybean	nucleus	35.0	10.69
CDY62377	Canola	plastid	33.08	10.54
Bra029471.1-P	Field mustard	plastid	32.31	10.33
AT4G14700.1	Thale cress	plastid	31.92	10.26
CDY16697	Canola	plastid	31.92	10.26
VIT_06s0004g02050.t01	Wine grape	nucleus	35.77	10.24
AT4G12620.1	Thale cress	plastid	31.15	9.96
VIT_06s0004g00530.t01	Wine grape	cytosol	17.31	6.97
HORVU3Hr1G084800.19	Barley	plastid	5.38	3.0
PGSC0003DMT400033355	Potato	cytosol	0.0	0.0
VIT_13s0175g00030.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G033880.2	EnsemblPlantsGene:HORVU3Hr1G033880	Gene3D:3.30.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:IPR013083	InterPro:IPR019787	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD
PFscan:PS50016	SEG:seg	SMART:SM00249	SUPFAM:SSF57903	UniParc:UPI000B477C46	UniProt:A0A287KQ43
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:181195888..181197299

Molecular Weight (calculated)

28548.2 Da

IEP (calculated)

10.109

GRAVY (calculated)

-0.775

Length

260 amino acids

Sequence
(BLAST)

001: MAAAAQMEFS TPSKPTPRRK SKSVASPPPM SPATPSTVRR SSRLLETPAK DLSEAALFET PAKPKPKAVL FETPAKPKPA PTLKRKRAAP SPSPKTPTQT
101: ERKPKRQRRL PTNRVYYRKV VYDGGEFAAG DDVYIKRLEG EESDAEDPEA EDCRVCFRAG GGVMVECDAC LXXXXLRCVR PPLRRVPEGD WACPYCKAEH
201: EGRAMDRPKP PVGKKIKRTA KEKLLASDLW AARIESDGLV ATDVLSEKWM WNSVSEWYNR

Best Arabidopsis Sequence Match ( AT4G14700.1 )
(BLAST)

001: MASSLSSKAK TFKSPTKTPT KMYRKSYLSP SSTSLTPPQT PETLTPLRRS SRHVSRKINL GNDPIDLPGK ESVEEINLIR KPRKRTNDIV VAEKSKKKKI
101: DPEVSFSPVS PIRSETKKTK KKKRVYYNKV EFDETEFEIG DDVYVKRTED ANPDEEEEED PEIEDCQICF KSHTNTIMIE CDDCLGGFHL NCLKPPLKEV
201: PEGDWICQFC EVKKSGQTLV VVPKPPEGKK LARTMKEKLL SSDLWAARIE KLWKEVDDGV YWIRARWYMI PEETVLGRQR HNLKRELYLT NDFADIEMEC
301: VLRHCFVKCP KEFSKASNDG DDVFLCEYEY DVHWGSFKRV AELADGDEDS DQEWNGRKEE EIDYSDEEIE FDDEESVRGV SKSKRGGANS RKGRFFGLEK
401: VGMKRIPEHV RCHKQSELEK AKATLLLATR PKSLPCRSKE MEEITAFIKG SISDDQCLGR CMYIHGVPGT GKTISVLSVM KNLKAEVEAG SVSPYCFVEI
501: NGLKLASPEN IYSVIYEGLS GHRVGWKKAL QSLNERFAEG KKIGKENEKP CILLIDELDV LVTRNQSVLY NILDWPTKPN SKLVVLGIAN TMDLPEKLLP
601: RISSRMGIQR LCFGPYNHRQ LQEIISTRLE GINAFEKTAI EFASRKVAAI SGDARRALEI CRRAAEVADY RLKKSNISAK SQLVIMADVE VAIQEMFQAP
701: HIQVMKSVSK LSRIFLTAMV HELYKTGMAE TSFDRVATTV SSICLTNGEA FPGWDILLKI GCDLGECRIV LCEPGEKHRL QKLQLNFPSD DVAFALKDNK
801: DLPWLANYL

Arabidopsis Description

ORC1AOrigin of replication complex subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q710E8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.