CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05529

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08455.1	EES05529	AT1G26830.1	15749712
AT4G08455.1	EES05529	AT1G69670.1	15749712

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019328_P003	Maize	cytosol	90.23	86.19
Os07t0258700-01	Rice	cytosol	81.64	84.96
TraesCS6B01G062000.1	Wheat	cytosol	78.12	79.05
TraesCS6A01G046100.1	Wheat	cytosol	45.31	78.38
TraesCS6D01G053100.1	Wheat	cytosol	77.73	77.43
TraesCS6A01G045900.1	Wheat	cytosol	76.95	76.65
HORVU6Hr1G009330.1	Barley	cytosol	76.17	73.31
GSMUA_Achr8P32570_001	Banana	cytosol	64.45	66.8
VIT_18s0001g01590.t01	Wine grape	cytosol	60.55	58.71
Solyc02g032510.2.1	Tomato	cytosol	58.98	54.12
CDX83137	Canola	cytosol	56.25	53.93
CDY34003	Canola	nucleus	36.33	53.76
CDY34002	Canola	cytosol	14.84	53.52
AT4G08455.1	Thale cress	cytosol	56.25	53.33
KRH53314	Soybean	cytosol, mitochondrion	50.39	49.62
KRH64603	Soybean	cytosol	50.0	49.61
EES09114	Sorghum	cytosol	21.48	19.86

Protein Annotations

Gene3D:1.25.40.420	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8054436	InterPro:BTB/POZ_dom	UniProt:C5X2P8
ncoils:Coil	ProteinID:EER96162.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538	GO:GO:0030162	GO:GO:0031625
GO:GO:0042787	GO:GO:0043161	InterPro:IPR000210	EnsemblPlants:OQU88783	ProteinID:OQU88783	ProteinID:OQU88783.1
PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF131	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
EnsemblPlantsGene:SORBI_3002G095700	SUPFAM:SSF54695	UniParc:UPI0001A83A90	RefSeq:XP_002459641.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:9892324..9895125

Molecular Weight (calculated)

28724.8 Da

IEP (calculated)

4.697

GRAVY (calculated)

-0.413

Length

256 amino acids

Sequence
(BLAST)

001: MWCHSCKEGY DEEDAGTCKE CYDEASETEE ELKREIEELR SRLHFLRLPS PTLDAASAPN CDLLLHAIPS CPSSSGAGGD GDAARTPDTP AVPAHRVILA
101: SRSPVFRAML ENEMEESRSG VIKIYDVSYD VLRAFVNYMY TAEALLDEQM ASDLLVLAEK YEVKHLKAYC ERFIISKVNN ENAITHYAFA HRHSAKQLLE
201: ASLSVLMGSM STLADREEYK ELVEKDPRLV VEIYEAYLNR QVNTAAGKDT DCSSRK

Best Arabidopsis Sequence Match ( AT4G08455.1 )
(BLAST)

001: MRRHHHRCQI GSDSETGSES DSDTDTPMRC ISCREEYLPR NAGTCKECYV EAGETEEELK REIDDLKAKV AFLRLSSSLD HGTSSTSRSF TDVVLIASED
101: NAGSPPIPAH KSVLVSRSPV FKAMLENEME ESLSGTIKIS DVSYDALRTF VYYLYTAEAC LDEQMACDLL VMSEKYQVKH LKSYCERFLV TKLSPDNSLM
201: TYAFAHQHNA KHVLDAALSQ IVENMDKLTK REEYMELVEK DPRLIVEIYE AYLSKQVNTA AGGTSTSKTS

Arabidopsis Description

BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G08455]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.