CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028457_P001	Maize	mitochondrion	88.71	82.5
Os03t0257500-01	Rice	mitochondrion	70.97	68.39
TraesCS4D01G219500.2	Wheat	mitochondrion	65.05	65.76
TraesCS4A01G084900.2	Wheat	mitochondrion	63.44	65.19
HORVU4Hr1G062250.1	Barley	mitochondrion	63.44	64.13
TraesCS4B01G219300.1	Wheat	mitochondrion	62.37	63.04
OQU90964	Sorghum	mitochondrion	55.38	61.68
TraesCS4B01G219400.1	Wheat	mitochondrion	75.27	53.03
TraesCS4D01G219800.1	Wheat	mitochondrion	74.73	49.47
HORVU4Hr1G062260.2	Barley	plastid	74.73	48.77
TraesCS4A01G084800.1	Wheat	mitochondrion	73.12	48.23
VIT_14s0006g03050.t01	Wine grape	mitochondrion	32.8	39.1
Solyc02g085830.2.1	Tomato	mitochondrion	33.33	29.81
PGSC0003DMT400032944	Potato	mitochondrion	33.33	29.81
EER93588	Sorghum	mitochondrion	44.62	24.27
EER92527	Sorghum	mitochondrion, plastid	66.13	22.95
KXG19452	Sorghum	mitochondrion	31.72	21.45
KXG33152	Sorghum	mitochondrion	34.41	19.94
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	44.09	19.25
KRH46919	Soybean	mitochondrion	41.4	18.78
KRH75395	Soybean	mitochondrion	39.78	18.36
PGSC0003DMT400033769	Potato	mitochondrion	41.94	18.27
Solyc05g009550.2.1	Tomato	mitochondrion	41.94	18.27
GSMUA_Achr6P24100_001	Banana	mitochondrion	47.85	18.2
KRH45249	Soybean	mitochondrion	38.71	18.18
CDY21093	Canola	mitochondrion	37.63	17.72
KRH01764	Soybean	mitochondrion	41.94	17.65
CDY50176	Canola	mitochondrion	37.1	17.51
CDY19375	Canola	mitochondrion	36.56	16.67
GSMUA_Achr10P...	Banana	mitochondrion	43.01	16.53
AT1G13340.1	Thale cress	mitochondrion	36.02	16.38
VIT_01s0011g03330.t01	Wine grape	mitochondrion	37.63	14.96
Bra019826.1-P	Field mustard	mitochondrion	36.02	13.56
EER99304	Sorghum	plastid	33.33	12.92
KXG24567	Sorghum	cytosol, plastid	34.41	12.4
Bra016733.1-P	Field mustard	mitochondrion	37.63	9.37
EES04550	Sorghum	nucleus	29.03	7.91
KXG20673	Sorghum	cytosol, nucleus, plastid	27.42	6.5
EES03498	Sorghum	nucleus, plastid	30.11	4.53

Protein Annotations

EnsemblPlants:EER92528	EnsemblPlantsGene:SORBI_3001G431900	EntrezGene:8054314	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF26	PFAM:PF03398	ProteinID:EER92528
ProteinID:EER92528.1	RefSeq:XP_002465530.1	SEG:seg	UniParc:UPI0001A82654	UniProt:C5WQT7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr1:+:71079123..71080801

Molecular Weight (calculated)

20789.3 Da

IEP (calculated)

8.086

GRAVY (calculated)

-0.240

Length

186 amino acids

Sequence
(BLAST)

001: MGFIHRTSKQ TSKVKTLLGL ALPRLAAARR PRLARRSISR SDVGQLLALG HLDRALHRAE QFIEEDNMLE AFDIIELYCN RLIEHAKQLD KPNECGEDIQ
101: EAAAGIMFAA GRCSDLPELM FARTILANKF GGDFTAMAKE GTGVVDPMLV WKLSGNKRNM EMKKKVVKEI AAENNVLLDF SEFQEG

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.