Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024425_P003 | Maize | cytosol | 83.52 | 80.42 |
| TraesCS3B01G498800.1 | Wheat | cytosol | 70.33 | 75.15 |
| HORVU3Hr1G098720.3 | Barley | cytosol | 69.96 | 74.46 |
| TraesCS3D01G451700.1 | Wheat | cytosol | 69.6 | 74.22 |
| TraesCS3A01G459100.1 | Wheat | cytosol, plastid | 69.23 | 73.54 |
| Os08t0175200-01 | Rice | nucleus | 73.63 | 71.66 |
| Zm00001d052541_P001 | Maize | extracellular | 14.65 | 55.56 |
| Zm00001d028142_P001 | Maize | cytosol | 9.71 | 53.0 |
| GSMUA_Achr5P23420_001 | Banana | mitochondrion | 47.25 | 52.65 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 9.52 | 52.0 |
| VIT_18s0164g00040.t01 | Wine grape | nucleus | 49.82 | 50.46 |
| KRH08570 | Soybean | nucleus | 47.62 | 49.24 |
| GSMUA_Achr6P02830_001 | Banana | cytosol | 52.56 | 48.81 |
| KRH70215 | Soybean | nucleus | 47.8 | 48.6 |
| PGSC0003DMT400070850 | Potato | cytosol | 46.52 | 48.11 |
| Solyc04g072560.2.1 | Tomato | nucleus, unclear | 46.34 | 47.92 |
| KRH35011 | Soybean | mitochondrion | 31.14 | 43.7 |
| Zm00001d043813_P001 | Maize | mitochondrion | 25.64 | 43.61 |
| Bra036745.1-P | Field mustard | nucleus | 42.86 | 41.34 |
| CDY46461 | Canola | cytosol, mitochondrion, nucleus | 42.86 | 41.34 |
| CDY48635 | Canola | cytosol | 25.09 | 40.9 |
| CDX91784 | Canola | nucleus | 42.86 | 40.34 |
| AT1G34220.1 | Thale cress | nucleus | 45.6 | 38.37 |
| Zm00001d028457_P001 | Maize | mitochondrion | 11.17 | 30.5 |
| Zm00001d034058_P004 | Maize | mitochondrion | 10.26 | 29.47 |
| Zm00001d021453_P002 | Maize | plastid | 28.02 | 29.25 |
| Zm00001d033714_P001 | Maize | mitochondrion | 17.03 | 26.5 |
| Zm00001d034057_P001 | Maize | mitochondrion | 10.44 | 24.89 |
| Zm00001d047887_P001 | Maize | mitochondrion | 10.81 | 23.69 |
| Zm00001d047885_P001 | Maize | mitochondrion | 10.81 | 23.6 |
| Zm00001d047886_P001 | Maize | mitochondrion | 10.81 | 23.6 |
| Zm00001d047884_P001 | Maize | cytosol | 5.13 | 19.58 |
| Zm00001d028456_P001 | Maize | mitochondrion | 16.12 | 16.57 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 28.57 | 12.88 |
| Zm00001d053852_P001 | Maize | nucleus | 13.19 | 10.51 |
| Zm00001d014521_P001 | Maize | mitochondrion | 12.64 | 8.95 |
| Zm00001d036913_P001 | Maize | cytosol | 5.68 | 5.07 |
| Zm00001d051744_P001 | Maize | nucleus | 3.11 | 3.39 |
Protein Annotations
| EnsemblPlants:Zm00001d049479_P003 | EnsemblPlants:Zm00001d049479_T003 | EnsemblPlantsGene:Zm00001d049479 | EntrezGene:100272774 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | InterPro:Ist1 | ncoils:Coil | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF5 | PFAM:PF03398 |
| ProteinID:AQK50630.1 | SEG:seg | UniParc:UPI0008438E43 | UniProt:A0A1D6PVM6 | MapMan:35.2 | : |
Description
Regulator of Vps4 activity in the MVB pathway protein
Coordinates
chr4:+:31729260..31732664
Molecular Weight (calculated)
60305.0 Da
IEP (calculated)
5.155
GRAVY (calculated)
-0.414
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAFFGKGGG GGGFRGAKCK TLLKLSIPRI KLLRNRRELQ LRQMRRDIAK LLEAGQEATA RIRVEHIIRE ENMMAAQEIL ELFCELIAVR LPIIETQRFA
101: PLALYLTSIL QPVIAITVCL FMRPRPTGRI ILKECPIDLK EAISSICFAA PRCADLPELI QVQMMFATKY GKEFVAAASE LMPDCGVNRQ IIELLSIRPP
201: PVHAKLKLLK EIAEEHEVDW DPSETEIEFL KPHEDLLNGP TYFNGSTLPL PKEKHEETVA ASAAERPDKD CESDTGLDSL DFPEVPKAAI RPPSNTPLTP
301: DIGPHAPGSQ PLPREFSDRT NLEENPTAGG AFNVIQMKSL EHLISAPSAQ PNTPDLPDEK KQFIPFASPP PVVATPLEKT ETVPSPSMSP PVKPTEPKIS
401: TKRVDELATP PVPPTDYTFT KQPEQVRPIS SESEASIDLD DVLSAAQTAA ESAERAASAA RAAANLVQLR IADLKKNSRV YNKYTDSAQK ESPHQAEGTQ
501: KPVFDHQDSF TNETQDYVPS HVPQRSPSLE DDPYFSYPNL FSAPKP
101: PLALYLTSIL QPVIAITVCL FMRPRPTGRI ILKECPIDLK EAISSICFAA PRCADLPELI QVQMMFATKY GKEFVAAASE LMPDCGVNRQ IIELLSIRPP
201: PVHAKLKLLK EIAEEHEVDW DPSETEIEFL KPHEDLLNGP TYFNGSTLPL PKEKHEETVA ASAAERPDKD CESDTGLDSL DFPEVPKAAI RPPSNTPLTP
301: DIGPHAPGSQ PLPREFSDRT NLEENPTAGG AFNVIQMKSL EHLISAPSAQ PNTPDLPDEK KQFIPFASPP PVVATPLEKT ETVPSPSMSP PVKPTEPKIS
401: TKRVDELATP PVPPTDYTFT KQPEQVRPIS SESEASIDLD DVLSAAQTAA ESAERAASAA RAAANLVQLR IADLKKNSRV YNKYTDSAQK ESPHQAEGTQ
501: KPVFDHQDSF TNETQDYVPS HVPQRSPSLE DDPYFSYPNL FSAPKP
001: MSMLDSFFNK GFKAAKCKTL LKLTIPRIKL IRNRREAQIK QMRREIAKLL ETGQEATARI RVEHIIREEK MMAAQEILEL FCELIAVRLP IIEAQRECPL
101: DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
201: DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
301: AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
401: PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
501: DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
601: DPSSGSHSFS DNTRPAHDS
101: DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
201: DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
301: AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
401: PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
501: DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
601: DPSSGSHSFS DNTRPAHDS
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4HUX0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.