CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028555.1-P	Field mustard	nucleus	97.38	97.38
CDY51100	Canola	cytosol	94.17	95.0
CDX97072	Canola	nucleus	81.34	72.09
CDX69793	Canola	nucleus	79.01	72.07
AT5G11000.1	Thale cress	cytosol, plastid	81.05	71.47
PGSC0003DMT400068894	Potato	plastid	46.65	45.85
Solyc08g028780.1.1	Tomato	mitochondrion	44.9	45.43
KRH52365	Soybean	plastid	43.44	44.74
KRH15788	Soybean	plastid	44.31	44.44
KRH05263	Soybean	mitochondrion, plastid	44.02	44.41
CDY56275	Canola	cytosol	19.53	43.79
KRH61697	Soybean	plastid	38.78	42.77
CDX76763	Canola	plastid	41.98	41.26
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	36.44	32.89
CDY72112	Canola	cytosol, peroxisome, plastid	26.53	32.27
GSMUA_Achr3P04550_001	Banana	plastid	24.78	31.95
CDY21108	Canola	plastid	26.24	31.91
Zm00001d032164_P001	Maize	plastid	37.32	31.68
Zm00001d050436_P001	Maize	plastid	37.61	31.62
CDY50761	Canola	cytosol, peroxisome, plastid	25.95	31.01
CDY27882	Canola	nucleus	26.24	30.93
CDY00849	Canola	nucleus	26.24	30.93
CDY30020	Canola	cytosol, plastid	25.36	30.85
Os08t0439600-00	Rice	plastid	36.44	30.79
CDX86191	Canola	plastid	26.24	30.72
TraesCS5A01G226100.1	Wheat	plastid	37.03	30.68
CDY00013	Canola	cytosol, plastid	26.24	30.51
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	36.15	30.47
TraesCS5B01G224600.1	Wheat	plastid	36.73	30.43
TraesCS5D01G233300.1	Wheat	plastid	36.73	30.43
EES13906	Sorghum	plastid	37.03	30.38
CDY52485	Canola	plastid	25.95	30.38
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	34.11	30.08
Os06t0181800-00	Rice	plastid	30.32	29.63
CDY66553	Canola	cytosol	23.91	29.08
Zm00001d005752_P001	Maize	plastid	35.57	28.98
Zm00001d020470_P001	Maize	plastid	35.57	28.98
CDY00069	Canola	plastid	25.66	28.57
Zm00001d045119_P001	Maize	plastid	29.15	28.49
TraesCS7A01G146000.1	Wheat	plastid	28.28	28.45
Os09t0416600-02	Rice	plastid	36.73	28.38
CDY05690	Canola	mitochondrion, plastid	24.78	28.33
CDX82547	Canola	cytosol	23.91	28.18
EER87970	Sorghum	plastid	29.45	28.13
CDY19961	Canola	plastid	25.07	28.1
HORVU5Hr1G065520.1	Barley	plastid	37.03	28.1
KXG35635	Sorghum	plastid	36.15	27.8
CDX85324	Canola	plastid	22.45	27.7
CDX86317	Canola	plastid	24.78	27.69
CDY48744	Canola	mitochondrion, plastid	24.2	27.3
CDX77134	Canola	cytosol, plastid	24.78	26.32
TraesCS7B01G048400.1	Wheat	plastid	28.57	24.94
CDY30531	Canola	plastid	23.62	24.7
TraesCS7D01G147500.1	Wheat	plastid	28.28	24.68
CDX79683	Canola	cytosol	22.74	24.61
CDX84556	Canola	cytosol	22.74	24.3
HORVU7Hr1G029920.1	Barley	mitochondrion	27.41	23.62
CDY59819	Canola	cytosol, mitochondrion, plasma membrane	26.53	20.5
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	15.16	20.0
CDY33155	Canola	cytosol	22.45	19.25
Zm00001d037575_P001	Maize	cytosol	13.12	18.67

Protein Annotations

EnsemblPlants:CDX85733	EnsemblPlantsGene:GSBRNA2T00143483001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF3	PFAM:PF05910
ProteinID:CDX85733	ProteinID:CDX85733.1	SEG:seg	UniParc:UPI0004EED8C7	MapMan:35.2	:

Description

BnaA02g00800D

Coordinates

chrLK031842:+:1478062..1479180

Molecular Weight (calculated)

38005.9 Da

IEP (calculated)

9.520

GRAVY (calculated)

-0.298

Length

343 amino acids

Sequence
(BLAST)

001: MSPSPSRSPI VSGDPNLTTC LYQTDHGVFY LTWSRTFLGG HSLNLFLHSQ DYYNSHSSPL SFSSLSSLAS FHLTLNTLTF WRKRGSKFIS SNIQVLWDLT
101: RAKFESGSEP RSGFYVAVIV DGEVGLLVGD SGDTRVKSPA NRQALVMRKE HVFGGSVFAT KARFGGKNRE IKIDCCVDED ARLCFSVDSE KVLEVKRLRW
201: KFRGNERVEI DGVAVQISWD VYNWLFQGKG LGHGVFMFRF ESDPEEREGS GNDVVLWKPR KCGSGFKGMV EWRKMRRRFV KSKRSSSSSS LSMSMSSASS
301: ACSSSVLEWA SSADESEYGG GGSSGLGSGN GLGFSLLVYA WIK

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.