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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 4
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042425_P001 Maize plastid 78.77 82.32
HORVU3Hr1G092470.1 Barley plastid 79.08 81.59
EES04078 Sorghum plastid 78.77 79.01
TraesCS3A01G415900.1 Wheat plastid 77.23 78.93
TraesCS3D01G411600.1 Wheat plastid 78.15 78.4
TraesCS3B01G451100.1 Wheat plastid 76.62 77.81
PGSC0003DMT400046694 Potato cytosol 50.77 51.72
VIT_01s0137g00740.t01 Wine grape cytosol 47.69 51.67
Solyc03g112130.1.1 Tomato cytosol 50.46 51.57
GSMUA_Achr10P... Banana cytosol 49.54 50.63
KRH57148 Soybean cytosol 50.46 50.31
VIT_17s0000g09400.t01 Wine grape cytosol 50.77 50.15
KRH03859 Soybean cytosol 40.62 49.25
KRH54304 Soybean cytosol 49.23 49.08
KRH63641 Soybean cytosol 48.31 48.16
Os05t0108400-01 Rice cytosol 40.92 43.46
Os07t0572300-01 Rice plastid 33.23 38.03
Os03t0806700-01 Rice cytosol, endoplasmic reticulum, peroxisome, plastid 33.85 37.8
Os02t0198800-01 Rice cytosol, nucleus 37.23 32.53
Os04t0407500-00 Rice cytosol, plastid 18.15 23.6
Os08t0439600-00 Rice plastid 28.92 23.15
Os12t0149000-01 Rice plastid 22.77 22.56
Os09t0416600-02 Rice plastid 30.15 22.07
Os06t0181800-00 Rice plastid 22.77 21.08
Os02t0695050-00 Rice extracellular, golgi, mitochondrion 12.62 15.77
Protein Annotations
EnsemblPlants:Os01t0909400-01EnsemblPlantsGene:Os01g0909400EntrezGene:4324866InterPro:DUF868_plnPANTHER:PTHR31972PANTHER:PTHR31972:SF12
PFAM:PF05910ProteinID:BAD82328.1ProteinID:BAF07064.1ProteinID:BAS75823.1RefSeq:XP_015616385.1SEG:seg
UniParc:UPI000049EA08UniProt:Q5N869MapMan:35.2:::
Description
Protein of unknown function DUF868, plant family protein. (Os01t0909400-01)
Coordinates
chr1:-:39613030..39614338
Molecular Weight (calculated)
35531.2 Da
IEP (calculated)
7.956
GRAVY (calculated)
-0.202
Length
325 amino acids
Sequence
(BLAST)
001: MMQDLFSVPS CFSSGEKLPD IPSSGTAAAA AAARQSAVTL VYRAEISGHR RLVTVTWCRN LLTHGLSVSI EGSAGNGKDK IGREYGEAAV AATAADGGGG
101: GGGGKSCSAC KVEMQPWHFW RKYGAKQFQV DGNAIDVVWD LRSARFSDEP EPLSDYYVAV VAGEEVVLLL GNLKKDAFRR TGSRPSLQDA VLVCKKEHVF
201: SKKRFVTKAR FSDRGKLHDI SIECSSSNLT GGTDVDMAIK IDGCVSVLVR HLQWKFRGNE CISINKLKVQ VYWDAHDWLF GTGMRHALFI FKPEPPSPSP
301: PGASSEFSTD EYSDFCLFLY AWKVE
Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)
001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE
Arabidopsis Description
At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.