Factsheet for Solyc09g075960.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 3
plasma membrane 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077341	Potato	cytosol, peroxisome, plasma membrane	97.36	97.36
VIT_05s0020g03340.t01	Wine grape	cytosol	66.34	67.0
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	55.78	64.75
Solyc01g097790.2.1	Tomato	cytosol	63.04	63.88
KRG95548	Soybean	cytosol	63.37	63.79
KRH32026	Soybean	cytosol, plastid	62.38	63.0
KRH71412	Soybean	cytosol	61.72	62.13
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	53.8	61.74
GSMUA_Achr5P24690_001	Banana	cytosol	58.09	60.69
KRH67230	Soybean	cytosol	61.39	59.42
EER93250	Sorghum	cytosol, plastid	56.11	58.42
Zm00001d013042_P001	Maize	plastid	56.11	58.42
Os03t0806700-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	55.45	57.73
HORVU5Hr1G109570.1	Barley	cytosol, plastid	54.79	56.85
Zm00001d034527_P001	Maize	plastid	55.12	56.8
TraesCS5A01G456500.1	Wheat	plastid	54.13	56.16
TraesCS5D01G467300.1	Wheat	cytosol, plastid	53.8	52.92
Os07t0572300-01	Rice	plastid	49.51	52.82
TraesCS5B01G465500.1	Wheat	plastid	53.47	48.21
HORVU2Hr1G038060.1	Barley	plastid	44.22	47.86
TraesCS2D01G204300.1	Wheat	plastid	44.55	47.7
TraesCS2A01G196200.1	Wheat	plastid	44.22	47.35
TraesCS2B01G223900.1	Wheat	plastid	44.22	47.35
Zm00001d021869_P001	Maize	plastid	43.56	46.48
OQU90135	Sorghum	plastid	45.21	40.29
Solyc12g044670.1.1	Tomato	plastid	35.97	35.39
Solyc06g074500.1.1	Tomato	cytosol	35.31	35.31
Solyc03g112130.1.1	Tomato	cytosol	36.96	35.22
Solyc11g066930.1.1	Tomato	nucleus, plastid	35.64	33.86
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	32.01	32.99
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	34.32	32.7
Solyc12g015900.1.1	Tomato	cytosol	31.68	32.21
Solyc08g028780.1.1	Tomato	mitochondrion	35.31	31.56
Solyc01g097830.2.1	Tomato	cytosol, nucleus, peroxisome	31.02	27.17

Protein Annotations

EnsemblPlants:Solyc09g075960.1.1	EnsemblPlantsGene:Solyc09g075960.1	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF4	PFAM:PF05910
UniParc:UPI000276BD6E	UniProt:K4CVH3	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr9:-:67585652..67586563

Molecular Weight (calculated)

34031.2 Da

IEP (calculated)

8.034

GRAVY (calculated)

0.031

Length

303 amino acids

Sequence
(BLAST)

001: MRDFPSCFGE NGVQVADASC SNVVGVSKTP QNLVTCVYQC KLLGKSCLIT VVWTKSLMGQ CLSVEIDDMS HQCLCKVDVK PSLFSKRKGS RFLEVNACKI
101: DIYWDFSLAK FGSGPEPVEG YYLAVVCKGQ MVLCIGDLRK EAFKKSNATP SLSNAMFISK REHIFGKRVF STKAQFCYTG PVHDITIECD SSVIDDPCLL
201: VRIDSKTVMQ VKHLRWKFRG NYTVLIDGLP VEVFWDVHNW LFSSNFGNAV FMFQTCLSAE KLWNTQTLSD LSVMPWPYTE STLSNSKSPG LGFSLVLYVW
301: KND

Best Arabidopsis Sequence Match ( AT5G28150.1 )
(BLAST)

001: MKDFPSCFGE NGVQVADSSS SSNSGKNAQN LVTCIYQCRI RGRNCLITVT WTKNLMGQSV TVGVDDSCNQ SLCKVEIKPW LFTKRKGSKS LEAYSCNIDV
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE

Arabidopsis Description

At5g28150/T24G3_80 [Source:UniProtKB/TrEMBL;Acc:Q8RX84]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.