Factsheet for Bra036180.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19961	Canola	plastid	94.72	99.67
CDY00069	Canola	plastid	94.1	98.38
Bra037498.1-P	Field mustard	plastid	90.06	89.78
Bra020708.1-P	Field mustard	mitochondrion	87.58	87.58
AT5G48270.1	Thale cress	plastid	87.27	87.27
Bra015139.1-P	Field mustard	nucleus	57.45	61.26
KRH16994	Soybean	cytosol	53.73	56.72
KRH72631	Soybean	cytosol	53.42	56.03
VIT_12s0057g01390.t01	Wine grape	mitochondrion	53.42	55.13
Solyc12g044670.1.1	Tomato	plastid	52.48	54.87
PGSC0003DMT400069001	Potato	plastid	52.48	54.87
GSMUA_AchrUn_...	Banana	cytosol	44.72	51.61
PGSC0003DMT400006698	Potato	mitochondrion	49.07	51.3
KRG90008	Soybean	plastid	50.0	51.11
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	49.07	49.69
GSMUA_Achr3P12010_001	Banana	cytosol	40.68	47.46
Zm00001d015796_P001	Maize	cytosol	26.71	44.79
Zm00001d053654_P001	Maize	plastid	39.75	43.24
OQU84582	Sorghum	cytosol	41.3	41.43
TraesCS6B01G189500.1	Wheat	cytosol	38.2	39.42
TraesCS6D01G150500.1	Wheat	nucleus	37.89	38.98
TraesCS6A01G161700.1	Wheat	cytosol	37.58	38.66
HORVU6Hr1G032720.1	Barley	cytosol	37.58	38.41
Bra001495.1-P	Field mustard	cytosol	33.85	37.46
Bra040410.1-P	Field mustard	cytosol, nucleus, peroxisome	31.37	35.31
Bra040118.1-P	Field mustard	plastid	30.75	35.11
Bra009991.1-P	Field mustard	plastid	31.37	34.47
Os02t0198800-01	Rice	cytosol, nucleus	38.82	33.6
Bra036119.1-P	Field mustard	mitochondrion	31.68	26.7
Bra028555.1-P	Field mustard	nucleus	27.02	25.36
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	29.19	24.23
Bra034367.1-P	Field mustard	plastid	23.6	23.38
Bra023071.1-P	Field mustard	cytosol	22.05	22.12
Bra007811.1-P	Field mustard	plastid	23.6	21.71

Protein Annotations

EnsemblPlants:Bra036180.1	EnsemblPlants:Bra036180.1-P	EnsemblPlantsGene:Bra036180	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF2
PFAM:PF05910	SEG:seg	UniParc:UPI0002541E57	UniProt:M4F526	MapMan:35.2	:

Description

AT5G48270 (E=5e-151) | unknown protein

Coordinates

chrA09:-:2309082..2310050

Molecular Weight (calculated)

36119.2 Da

IEP (calculated)

7.986

GRAVY (calculated)

-0.169

Length

322 amino acids

Sequence
(BLAST)

001: MLSFRIPSLG SNPTAFAAKI TDTTKTVAQL KSAATPTPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMISSLDKD MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGTF VEVFWDLRAA KLSGNGSPEP VSEYYVAVVS DEEIVLLLGD LKHKAYKRTK SRPALVEGFI YFKKESVFGK KTFSTRARFD EQRKEHEVVV
201: VMEEKDPEMR ISVDGVVVVH VKNLQWKFRG NQMVLVDKTP VMVYYDVHDW LFGSSESTTT RSGLFLFKPV VVGAMVDEFF SDAEEGGDSG GGSSPLSRYN
301: SASSGYGTLH EFCLVLYAWK LE

Best Arabidopsis Sequence Match ( AT5G48270.1 )
(BLAST)

001: MLSFRMPSIG SQPTAFAAKI TDNPKTVAQL KSAASPSPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMVSSLDND MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGNF VEVFWDLRSA KLAGNGSPEP VSDYYVAVVS DEEVVLLLGD LKQKAYKRTK SRPALVEGFI YFKKESIFGK KTFSTRARFD EQRKEHEVVV
201: ESSNGAAEPE MWISVDGIVV VNVKNLQWKF RGNQMVMVDR TPVMVYYDVH DWLFASSETA ASSGLFLFKP VPVGAMVDES FSDAEEGDSG GGSSPLSRYN
301: SASSGFGPLH DFCLFLYAWK LE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9LUA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.