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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • peroxisome 1
  • extracellular 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27882 Canola nucleus 96.03 99.66
CDY00849 Canola nucleus 95.7 99.31
AT2G04220.1 Thale cress cytosol 92.72 91.21
Solyc12g044670.1.1 Tomato plastid 70.53 69.16
PGSC0003DMT400069001 Potato plastid 70.53 69.16
VIT_12s0057g01390.t01 Wine grape mitochondrion 68.21 66.03
PGSC0003DMT400006698 Potato mitochondrion 66.56 65.26
KRH16994 Soybean cytosol 65.56 64.92
Solyc03g121220.2.1 Tomato cytosol, mitochondrion, nucleus, plastid 66.56 63.21
KRH72631 Soybean cytosol 64.24 63.19
Bra037498.1-P Field mustard plastid 63.24 59.13
KRG90008 Soybean plastid 60.6 58.1
Bra036180.1-P Field mustard plastid 61.26 57.45
Bra020708.1-P Field mustard mitochondrion 60.6 56.83
GSMUA_AchrUn_... Banana cytosol 50.99 55.2
GSMUA_Achr3P12010_001 Banana cytosol 46.69 51.09
Zm00001d015796_P001 Maize cytosol 31.13 48.96
Zm00001d053654_P001 Maize plastid 44.04 44.93
TraesCS6B01G189500.1 Wheat cytosol 45.7 44.23
TraesCS6D01G150500.1 Wheat nucleus 45.36 43.77
TraesCS6A01G161700.1 Wheat cytosol 45.03 43.45
OQU84582 Sorghum cytosol 46.03 43.3
HORVU6Hr1G032720.1 Barley cytosol 45.03 43.17
Bra040118.1-P Field mustard plastid 36.76 39.36
Bra009991.1-P Field mustard plastid 37.75 38.91
Bra001495.1-P Field mustard cytosol 37.42 38.83
Bra040410.1-P Field mustard cytosol, nucleus, peroxisome 36.42 38.46
Os02t0198800-01 Rice cytosol, nucleus 43.38 35.22
Bra036119.1-P Field mustard mitochondrion 38.41 30.37
Bra028555.1-P Field mustard nucleus 29.8 26.24
Bra034367.1-P Field mustard plastid 26.82 24.92
Bra008998.1-P Field mustard nucleus, peroxisome, plastid 30.79 23.97
Bra023071.1-P Field mustard cytosol 24.5 23.05
Bra007811.1-P Field mustard plastid 25.5 22.0
Protein Annotations
EnsemblPlants:Bra015139.1EnsemblPlants:Bra015139.1-PEnsemblPlantsGene:Bra015139InterPro:DUF868_plnPANTHER:PTHR31972PANTHER:PTHR31972:SF2
PFAM:PF05910SEG:segUniParc:UPI0002540B68UniProt:M4DF67MapMan:35.2:
Description
AT2G04220 (E=2e-159) | unknown protein
Coordinates
chrA07:-:3144103..3145011
Molecular Weight (calculated)
34519.7 Da
IEP (calculated)
7.982
GRAVY (calculated)
-0.455
Length
302 amino acids
Sequence
(BLAST)
001: MSFRSHSTGS SQFAEKITDD PVTYKTAQST VTCIYQTHIS GFWRNVTVLW SKNLMNHSLT VMVTSVEGDM NYCCKVDLKP WHFWNKKGYK SFEVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVAEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKSFA TRAKFYDRKK EHEINVESSI SGTKEPEMWI
201: SIDGIVLVQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSAPGTGHGL FIFKPGNAED SDMEGSGHGG ESDTSTGSRY HSTKSGSWPP EFCLFLYAWK
301: LE
Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)
001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
Arabidopsis Description
DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.