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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400041923 Potato cytosol 16.37 48.37
PGSC0003DMT400017291 Potato cytosol, peroxisome, plastid 17.04 44.51
EER90880 Sorghum cytosol 62.39 41.05
Zm00001d034000_P002 Maize cytosol 62.17 40.61
TraesCS5B01G390300.3 Wheat cytosol 62.39 40.4
GSMUA_Achr7P27170_001 Banana cytosol 44.47 40.36
TraesCS5D01G395300.2 Wheat cytosol, nucleus, plastid 61.73 39.97
TraesCS5A01G385300.3 Wheat cytosol 60.84 39.4
PGSC0003DMT400082107 Potato cytosol 39.6 38.41
Solyc09g061540.1.1 Tomato cytosol 9.51 37.07
Solyc09g061580.1.1 Tomato cytosol 9.29 36.21
AT1G05410.1 Thale cress cytosol 36.73 35.24
CDY10107 Canola cytosol 35.84 34.39
HORVU5Hr1G094660.1 Barley plastid 34.29 34.29
CDY47288 Canola cytosol 35.4 33.97
Bra015422.1-P Field mustard cytosol 35.18 33.9
VIT_05s0020g03600.t01 Wine grape cytosol 36.28 33.2
KRH77849 Soybean nucleus 35.18 33.12
PGSC0003DMT400059456 Potato cytosol 25.66 32.77
KRH27646 Soybean cytosol, nucleus 34.29 32.49
PGSC0003DMT400092399 Potato cytosol 16.59 31.91
KRG99083 Soybean nucleus 34.29 31.83
PGSC0003DMT400077585 Potato cytosol 12.83 29.9
PGSC0003DMT400077583 Potato nucleus 25.44 28.33
PGSC0003DMT400090844 Potato cytosol 5.31 20.0
PGSC0003DMT400077587 Potato nucleus 16.15 14.78
KRH65951 Soybean plastid 10.18 13.33
CDY10650 Canola nucleus 15.93 12.37
PGSC0003DMT400082110 Potato nucleus 13.27 12.12
Bra037070.1-P Field mustard nucleus 13.94 12.09
CDY08296 Canola nucleus 13.94 12.09
Bra039958.1-P Field mustard nucleus 15.71 11.95
KRH76190 Soybean nucleus 11.95 11.84
KRH76186 Soybean nucleus 11.95 11.84
CDY06487 Canola nucleus 13.72 11.5
Bra001870.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 14.16 11.49
CDY10289 Canola nucleus 15.04 11.49
CDY24312 Canola nucleus 14.38 11.42
CDX92945 Canola nucleus 14.16 11.29
CDX98211 Canola nucleus 14.38 11.05
Bra023822.1-P Field mustard nucleus 14.16 10.85
CDY34248 Canola nucleus 14.16 10.83
AT4G14840.1 Thale cress nucleus 13.27 10.81
KRG90260 Soybean nucleus 11.06 10.64
AT3G22520.1 Thale cress nucleus 13.94 10.5
VIT_05s0020g03590.t01 Wine grape nucleus 11.95 10.04
CDY38302 Canola nucleus 15.27 10.01
VIT_17s0000g05270.t01 Wine grape nucleus 8.63 9.03
KRH33505 Soybean nucleus 11.28 8.87
VIT_12s0035g02120.t01 Wine grape nucleus 6.86 7.0
Protein Annotations
EnsemblPlants:Os03t0747200-01EnsemblPlantsGene:Os03g0747200InterPro:Oberon_PHDPANTHER:PTHR33345PANTHER:PTHR33345:SF2PFAM:PF07227
ProteinID:BAS86365.1SEG:segUniParc:UPI000393AEE3UniProt:A0A0P0W2X8MapMan:35.2:
Description
Protein of unknown function DUF1423, plant domain containing protein. (Os03t0747200-01)
Coordinates
chr3:-:30727013..30731434
Molecular Weight (calculated)
50751.5 Da
IEP (calculated)
5.537
GRAVY (calculated)
-0.405
Length
452 amino acids
Sequence
(BLAST)
001: DQWSWKVGNR ASATGHWLDR YLTPPSRFRD ATGKKTSFTS RLKVEEFIKT EFPDMDPNTF FSMFIWKIPA KGHCIQRGGG EVRRVFCPYA RQADPAGPCK
101: ARNNLCKLER EGFIESSPAQ DCDLCCKMPD FCRECCCVFC RRVVDYSFGG YSYIKCEAVL EENKICGHIG HLDCALRTFM AGTVGGCIDL DMQYCCRRCD
201: NKTNLMLHVE KFLEICQSLQ SRDDIEPILN TGLCLVRGSR QTRAKSLESI MRSAMAKLKC GVDLAEVWKM EDNGINSTPS AEVSPATGGV TVLGIQQAPE
301: EDAPPGFPYY VDLADNDLQR AVENLPAYIT EDQHTLSVRF EDSIDHALKE LKRSQEAEYK LAEQKLYSQK DHVLSLYRQL DSERSVLADP MPLADDDGSL
401: YSTLITNVMK RVDQVKSEEE KLKVMLGIAD GFGKTPSGVI QEHFGLPADT AN
Best Arabidopsis Sequence Match ( AT1G05410.1 )
(BLAST)
001: MDSMDIDQSN IGESPHLLLR PVSPLESGEG LPYAPENWPN PGDTWHWKVG PRISGKGYFV DRYLYPPKYL PGLDTEILRK NKVFRSRLSL QRYIRVHFPE
101: ADVQKFFASF SWSIPCRDGQ GVLPQKQVQL PVYSSDEDPM RDDGSDTAVC KAGNEKCRSL MPQCEAETLP AMPCDICCGE RKFCVDCCCI LCCKLISLEH
201: GGYSYIKCEA VVSEGHICGH VAHMNCALRA YLAGTIGGSM GLDTEYYCRR CDAKKDLFPH VNKFLEICQT VEYQGDVEKI LNLGICILRG AQRDNAKELL
301: NCIESTVIKL KCGTSLEDLW NDDTPTIWSD YSDSGEAREN DTLQSLQDVT PIGPIPFNHE AEMHKLEEEI GEVLRALRKA QEFEYQIAEG KLHAQKECLS
401: DLYRQLEKEK SELSRRVSGT DANSLMTNVL KRLDQIRKEV TKLKEMEEVA KGFGRTPRGV LEEYFHLNIE D
Arabidopsis Description
At1g05410/T25N20_5 [Source:UniProtKB/TrEMBL;Acc:Q8VZE5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.