Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34248 | Canola | nucleus | 98.14 | 97.97 |
| CDX98211 | Canola | nucleus | 91.86 | 92.18 |
| Bra039958.1-P | Field mustard | nucleus | 75.59 | 75.08 |
| Bra001870.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 68.98 | 73.07 |
| AT3G22520.1 | Thale cress | nucleus | 70.34 | 69.17 |
| Bra037070.1-P | Field mustard | nucleus | 55.59 | 62.96 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 29.66 | 32.53 |
| KRH76190 | Soybean | nucleus | 24.92 | 32.24 |
| KRH76186 | Soybean | nucleus | 24.92 | 32.24 |
| PGSC0003DMT400082110 | Potato | nucleus | 26.27 | 31.31 |
| KRG90260 | Soybean | nucleus | 24.58 | 30.85 |
| Solyc09g082130.2.1 | Tomato | nucleus | 21.36 | 30.43 |
| KRH65951 | Soybean | plastid | 16.44 | 28.12 |
| KRH33505 | Soybean | nucleus | 25.76 | 26.43 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 16.78 | 22.35 |
| Bra015422.1-P | Field mustard | cytosol | 12.71 | 15.99 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 13.05 | 15.46 |
| Os03t0747200-01 | Rice | cytosol | 10.85 | 14.16 |
| HORVU5Hr1G094660.1 | Barley | plastid | 10.68 | 13.94 |
| Zm00001d034000_P002 | Maize | cytosol | 15.25 | 13.01 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 15.08 | 12.75 |
| EER90880 | Sorghum | cytosol | 14.58 | 12.52 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 14.75 | 12.46 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 14.58 | 12.32 |
Protein Annotations
Description
AT3G22520 (E=7e-243) | unknown protein
Coordinates
chrA01:-:20202147..20204325
Molecular Weight (calculated)
66200.5 Da
IEP (calculated)
5.104
GRAVY (calculated)
-0.810
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPFYSPTN MQQDIGQSPP GFDNEPVPVS TYQDTEPVPL STYHENEPNG NQPEATQQEL DDFWENGFNR EEAIQEPKEN GKRRSVDNTS FAPGETDLNQ
101: LPPIPPVSTG QGPPYAPVDW PSPGDVWTWR VGRRVTALGF HQDRFLILPQ RLQQRNVPKS FASKPALARY IQMSFPEMDA DAFFASFSWK IPALFQPADK
201: VDDAASLFEE TPKEVKTEGA APSDKEGNSR YSQRKRNPMP TFESVVEKPK ATKKKKGAKT PGTTTGPQSS TKPKPSRQSS RRSSNQQSGG AVELNLQSEE
301: EGGGPATAPN TSGRRKKRRV NVEEEDVSIP HIYVSPMNGV LAVSHEPIDV DPIEFDSYLN SLENLLHQGP EDAGTESSVL VRASSPMREY EWAEARMKIS
401: SLLEKDFPTL FTSKDAAEIA ALATKLRKDP NLSAEEIVRL KLMEEIPTFS EVFQENKMVI EEADRFFSAL ELNKAKVASL KYEYSDLKHK LGSIQIEVDE
501: NSEAIRQIDE QMAQLQARRN ELKKYIGSKE KEKVDLSYGQ KMVANSIPKV VQEVQAANSK KPEWECKKEN ALKREEEILS KFNPLKGFFL
101: LPPIPPVSTG QGPPYAPVDW PSPGDVWTWR VGRRVTALGF HQDRFLILPQ RLQQRNVPKS FASKPALARY IQMSFPEMDA DAFFASFSWK IPALFQPADK
201: VDDAASLFEE TPKEVKTEGA APSDKEGNSR YSQRKRNPMP TFESVVEKPK ATKKKKGAKT PGTTTGPQSS TKPKPSRQSS RRSSNQQSGG AVELNLQSEE
301: EGGGPATAPN TSGRRKKRRV NVEEEDVSIP HIYVSPMNGV LAVSHEPIDV DPIEFDSYLN SLENLLHQGP EDAGTESSVL VRASSPMREY EWAEARMKIS
401: SLLEKDFPTL FTSKDAAEIA ALATKLRKDP NLSAEEIVRL KLMEEIPTFS EVFQENKMVI EEADRFFSAL ELNKAKVASL KYEYSDLKHK LGSIQIEVDE
501: NSEAIRQIDE QMAQLQARRN ELKKYIGSKE KEKVDLSYGQ KMVANSIPKV VQEVQAANSK KPEWECKKEN ALKREEEILS KFNPLKGFFL
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.