Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33505 | Soybean | nucleus | 86.38 | 70.61 |
| KRH76190 | Soybean | nucleus | 42.34 | 43.64 |
| KRH76186 | Soybean | nucleus | 42.34 | 43.64 |
| KRH65951 | Soybean | plastid | 27.45 | 37.39 |
| Bra037070.1-P | Field mustard | nucleus | 30.21 | 27.26 |
| CDY08296 | Canola | nucleus | 30.21 | 27.26 |
| AT4G14840.1 | Thale cress | nucleus | 31.06 | 26.31 |
| CDY06487 | Canola | nucleus | 30.0 | 26.16 |
| Bra001870.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.43 | 25.67 |
| PGSC0003DMT400082110 | Potato | nucleus | 26.81 | 25.45 |
| CDX92945 | Canola | nucleus | 30.64 | 25.4 |
| Bra023822.1-P | Field mustard | nucleus | 30.85 | 24.58 |
| CDY24312 | Canola | nucleus | 29.57 | 24.43 |
| CDY34248 | Canola | nucleus | 30.64 | 24.37 |
| CDX98211 | Canola | nucleus | 30.21 | 24.15 |
| AT3G22520.1 | Thale cress | nucleus | 30.64 | 24.0 |
| CDY10289 | Canola | nucleus | 30.21 | 23.99 |
| CDY10650 | Canola | nucleus | 29.57 | 23.88 |
| Bra039958.1-P | Field mustard | nucleus | 29.15 | 23.06 |
| Solyc09g082130.2.1 | Tomato | nucleus | 20.21 | 22.95 |
| CDY38302 | Canola | nucleus | 30.21 | 20.61 |
| VIT_17s0000g05270.t01 | Wine grape | nucleus | 17.02 | 18.52 |
| KRH77849 | Soybean | nucleus | 15.53 | 15.21 |
| KRH27646 | Soybean | cytosol, nucleus | 15.11 | 14.88 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 15.32 | 14.46 |
| KRG99083 | Soybean | nucleus | 14.47 | 13.96 |
| HORVU5Hr1G094660.1 | Barley | plastid | 11.91 | 12.39 |
| Os03t0747200-01 | Rice | cytosol | 10.64 | 11.06 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 14.89 | 10.03 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 14.89 | 10.03 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 14.47 | 9.74 |
| EER90880 | Sorghum | cytosol | 12.98 | 8.88 |
| Zm00001d034000_P002 | Maize | cytosol | 12.77 | 8.67 |
Protein Annotations
| EMBL:ACUP02012585 | EnsemblPlants:KRG90260 | EnsemblPlantsGene:GLYMA_20G078300 | EntrezGene:100809860 | ncoils:Coil | PANTHER:PTHR33345 |
| PANTHER:PTHR33345:SF3 | ProteinID:KRG90260 | ProteinID:KRG90260.1 | SEG:seg | UniParc:UPI000233D9A1 | UniProt:I1NEI7 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:29038365..29042190
Molecular Weight (calculated)
52507.6 Da
IEP (calculated)
6.562
GRAVY (calculated)
-0.558
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPDTLTST PTSSMDERES LKNDTPICSN ACKDVTKEKT FYLQPVSPFS SGVGLPYAPE GWPSPGDVWG WKVAKRMNSF GYFIDRFLTL PRSLETSRRK
101: TELRSKADIS RYLQSNFPDM KIEAFLALFS WQIPSTQQTP TKAVESLETG EDATDEIGTQ RKKLKLETGS VSHPTEKSLG LLALQSSETG EDATDKTGTT
201: GKKLKRKTRS VGRPPNKKSF GLVQGRPHLT PDQVAKFDDY LDTLEDMLVM PEIETTPSDN LTPTILDDNE TIECCKKKLS SLLAVDFSSL VSRGDVAEVA
301: TLAAQIREDP SLSVDQLFKL KLVEQVPLAS EAFLEAKKNI EEVDNFLADL EAKKLKVPSL RKEYNELKDK IGQQEAEMDI STLTIREIDD QIRQLQAKRN
401: RITNGLETMK KTKAELTSEL TNVANSISTI GHDIKHGLSQ KSKLELKKAN NIRRVAEIQE KFITLRGLTF
101: TELRSKADIS RYLQSNFPDM KIEAFLALFS WQIPSTQQTP TKAVESLETG EDATDEIGTQ RKKLKLETGS VSHPTEKSLG LLALQSSETG EDATDKTGTT
201: GKKLKRKTRS VGRPPNKKSF GLVQGRPHLT PDQVAKFDDY LDTLEDMLVM PEIETTPSDN LTPTILDDNE TIECCKKKLS SLLAVDFSSL VSRGDVAEVA
301: TLAAQIREDP SLSVDQLFKL KLVEQVPLAS EAFLEAKKNI EEVDNFLADL EAKKLKVPSL RKEYNELKDK IGQQEAEMDI STLTIREIDD QIRQLQAKRN
401: RITNGLETMK KTKAELTSEL TNVANSISTI GHDIKHGLSQ KSKLELKKAN NIRRVAEIQE KFITLRGLTF
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.