CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76186	Soybean	nucleus	38.84	29.39
KRH76190	Soybean	nucleus	38.84	29.39
KRG90260	Soybean	nucleus	37.39	27.45
KRH33505	Soybean	nucleus	37.39	22.43
CDY08296	Canola	nucleus	27.54	18.23
Bra037070.1-P	Field mustard	nucleus	27.54	18.23
Bra001870.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.99	17.95
PGSC0003DMT400082110	Potato	nucleus	25.51	17.78
CDX92945	Canola	nucleus	28.99	17.64
CDY06487	Canola	nucleus	27.25	17.44
Solyc09g082130.2.1	Tomato	nucleus	20.87	17.39
CDY24312	Canola	nucleus	28.41	17.22
CDY10650	Canola	nucleus	28.7	17.01
CDY10289	Canola	nucleus	28.99	16.89
CDX98211	Canola	nucleus	28.41	16.67
AT3G22520.1	Thale cress	nucleus	28.99	16.67
Bra039958.1-P	Field mustard	nucleus	28.41	16.5
Bra023822.1-P	Field mustard	nucleus	28.12	16.44
CDY34248	Canola	nucleus	28.12	16.41
AT4G14840.1	Thale cress	nucleus	26.38	16.4
CDY38302	Canola	nucleus	28.99	14.51
VIT_17s0000g05270.t01	Wine grape	nucleus	15.65	12.5
KRH77849	Soybean	nucleus	15.07	10.83
KRH27646	Soybean	cytosol, nucleus	14.49	10.48
KRG99083	Soybean	nucleus	14.78	10.47
GSMUA_Achr7P27170_001	Banana	cytosol	14.78	10.24
Os03t0747200-01	Rice	cytosol	13.33	10.18
HORVU5Hr1G094660.1	Barley	plastid	11.88	9.07
TraesCS5A01G385300.3	Wheat	cytosol	15.65	7.74
TraesCS5B01G390300.3	Wheat	cytosol	15.07	7.45
TraesCS5D01G395300.2	Wheat	cytosol, nucleus, plastid	15.07	7.45
EER90880	Sorghum	cytosol	12.75	6.4
Zm00001d034000_P002	Maize	cytosol	12.17	6.07

Protein Annotations

EMBL:ACUP02001807	EnsemblPlants:KRH65951	EnsemblPlantsGene:GLYMA_03G072400	ncoils:Coil	PANTHER:PTHR33345	PANTHER:PTHR33345:SF3
ProteinID:KRH65951	ProteinID:KRH65951.1	SEG:seg	UniParc:UPI0006ED8648	UniProt:A0A0R0KRW7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr3:+:17479083..17481683

Molecular Weight (calculated)

39747.2 Da

IEP (calculated)

9.827

GRAVY (calculated)

-0.427

Length

345 amino acids

Sequence
(BLAST)

001: MSPESVWAWH SSRVYIKTSA LTSSIDGRLV KRHLSSCVIR LGMTLLTKKV GRRTNETGYF HDSYLSLPRS LERSSRHSRR FQSKPVVQRY IESNFPNMKI
101: EEFFALFSWK VPTTKRTRTK EDTNPIQNFD KYLDTLDDLL GMPHTGITPC DDVTRGTSMD NKIEWCKKKL SSFLVVDFRS LVSYINLSVD ELAKLKLVEQ
201: ILLLSDAFME AKGKFKEAHK LLADLKEKLK VCRLKNDYVQ LKEKVTQTEA IIEGLVLNIQ EINDKILSLQ EKLMVKSNTL ENMQKSKAEL TSRLVYTANS
301: IPTLSEKIQV ELSERSKWEM EKANNAKHVA EIEEKLMCLR GLTSS

Best Arabidopsis Sequence Match ( AT3G22520.1 )
(BLAST)

001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL

Arabidopsis Description

Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.