CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76186	Soybean	nucleus	100.0	100.0
KRG90260	Soybean	nucleus	43.64	42.34
KRH65951	Soybean	plastid	29.39	38.84
KRH33505	Soybean	nucleus	43.2	34.26
Bra037070.1-P	Field mustard	nucleus	30.92	27.06
CDY08296	Canola	nucleus	30.92	27.06
CDY06487	Canola	nucleus	31.36	26.53
PGSC0003DMT400082110	Potato	nucleus	27.63	25.45
AT4G14840.1	Thale cress	nucleus	30.48	25.05
CDX98211	Canola	nucleus	32.24	25.0
Bra001870.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.48	24.96
Bra023822.1-P	Field mustard	nucleus	32.24	24.92
CDY34248	Canola	nucleus	32.02	24.7
CDY24312	Canola	nucleus	30.7	24.6
CDY10650	Canola	nucleus	31.14	24.4
CDY10289	Canola	nucleus	31.58	24.32
CDX92945	Canola	nucleus	30.04	24.16
AT3G22520.1	Thale cress	nucleus	31.58	24.0
Bra039958.1-P	Field mustard	nucleus	30.92	23.74
Solyc09g082130.2.1	Tomato	nucleus	20.83	22.95
CDY38302	Canola	nucleus	30.7	20.32
VIT_17s0000g05270.t01	Wine grape	nucleus	17.11	18.06
KRH27646	Soybean	cytosol, nucleus	17.32	16.56
KRH77849	Soybean	nucleus	17.11	16.25
KRG99083	Soybean	nucleus	16.45	15.4
GSMUA_Achr7P27170_001	Banana	cytosol	16.45	15.06
HORVU5Hr1G094660.1	Barley	plastid	12.94	13.05
Os03t0747200-01	Rice	cytosol	11.84	11.95
TraesCS5A01G385300.3	Wheat	cytosol	16.89	11.03
TraesCS5D01G395300.2	Wheat	cytosol, nucleus, plastid	16.45	10.74
TraesCS5B01G390300.3	Wheat	cytosol	16.01	10.46
EER90880	Sorghum	cytosol	15.13	10.04
Zm00001d034000_P002	Maize	cytosol	14.69	9.68

Protein Annotations

EMBL:ACUP02000582	EnsemblPlants:KRH76190	EnsemblPlantsGene:GLYMA_01G138200	EntrezGene:100810295	EntrezGene:100810820	ncoils:Coil
PANTHER:PTHR33345	PANTHER:PTHR33345:SF3	ProteinID:KRH76186.1	ProteinID:KRH76190	ProteinID:KRH76190.1	UniParc:UPI000233709B
UniProt:K7K3Q3	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:46545425..46548582

Molecular Weight (calculated)

51006.4 Da

IEP (calculated)

5.802

GRAVY (calculated)

-0.599

Length

456 amino acids

Sequence
(BLAST)

001: MALSDTSTPT SCQEEKGSDC DSPIESNVCD DLSLTKERTF DLKPVSPNSS GQGLPYAPEG WPNPSDVWGW KVLKRTSNAG HFCDRHLYLP KSLQISSHKR
101: QSFRTKRDVE RYIESNFPNM GIEAFFGLFS WKIPATKKTP RKVKSLETEE AGNATEQIGT KLKRKIQICS QPTRKSSKLL HLRPHIVPDQ DANIVIDLCD
201: QDDEEARVDS TENSKGISDS EEGSAMQTAV EKDPKAINVL ENLDTLENSP DHATLDNEII QYCKKKLSFL LDVDFPSLLS CNDVVVEVAT LASQIRKDPT
301: LSVEQLAQVK LVEQLPLVSE AFLEAKGDIE EADKFLGVLE AKKRKVLSLK NDYKEKVAQR ESEMDRNTLA IQEIDDQIRQ LQSKRSELSA ALESMQKGKV
401: ELTSGEAGVA NSILSLVGEI NHGLSEKSKW EMKKANSARR VAEIQKKFIN IRGLKF

Best Arabidopsis Sequence Match ( AT3G22520.1 )
(BLAST)

001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL

Arabidopsis Description

Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.