Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039958.1-P | Field mustard | nucleus | 93.13 | 91.25 |
| CDY10289 | Canola | nucleus | 88.49 | 86.99 |
| CDX98211 | Canola | nucleus | 77.32 | 76.53 |
| CDY34248 | Canola | nucleus | 75.26 | 74.11 |
| CDY38302 | Canola | nucleus | 85.4 | 72.13 |
| CDY24312 | Canola | nucleus | 70.1 | 71.7 |
| CDX92945 | Canola | nucleus | 68.56 | 70.37 |
| AT3G22520.1 | Thale cress | nucleus | 71.99 | 69.83 |
| CDY08296 | Canola | nucleus | 55.15 | 61.61 |
| CDY06487 | Canola | nucleus | 56.01 | 60.48 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 29.9 | 32.34 |
| KRH76186 | Soybean | nucleus | 24.4 | 31.14 |
| KRH76190 | Soybean | nucleus | 24.4 | 31.14 |
| PGSC0003DMT400082110 | Potato | nucleus | 26.12 | 30.71 |
| KRG90260 | Soybean | nucleus | 23.88 | 29.57 |
| Solyc09g082130.2.1 | Tomato | nucleus | 20.62 | 28.99 |
| KRH65951 | Soybean | plastid | 17.01 | 28.7 |
| KRH33505 | Soybean | nucleus | 25.09 | 25.39 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 16.15 | 21.22 |
| CDY47288 | Canola | cytosol | 13.23 | 16.35 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 13.92 | 16.27 |
| Os03t0747200-01 | Rice | cytosol | 12.37 | 15.93 |
| CDY10107 | Canola | cytosol | 12.89 | 15.92 |
| HORVU5Hr1G094660.1 | Barley | plastid | 11.86 | 15.27 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 16.67 | 13.9 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 16.32 | 13.61 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 16.15 | 13.47 |
| Zm00001d034000_P002 | Maize | cytosol | 15.81 | 13.29 |
| EER90880 | Sorghum | cytosol | 15.12 | 12.81 |
Protein Annotations
| EnsemblPlants:CDY10650 | EnsemblPlantsGene:GSBRNA2T00048399001 | ncoils:Coil | PANTHER:PTHR33345 | PANTHER:PTHR33345:SF3 | ProteinID:CDY10650 |
| ProteinID:CDY10650.1 | SEG:seg | UniParc:UPI0004EEAD3C | UniProt:A0A078F867 | MapMan:35.2 | : |
Description
BnaA05g17120DBnaA05g17120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F867]
Coordinates
chrLK032005:+:304467..307259
Molecular Weight (calculated)
65733.5 Da
IEP (calculated)
5.775
GRAVY (calculated)
-0.842
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPFYSSTD IHQQQIGQTP PGYFTCRFDT EPVPLSTYRE AEPDPFHATQ QEKDDFWNNG FNREEPESFQ AKENGKRSVD HNSSFTHGET DLNQLPAIPQ
101: FSTGQGLPYA PVDWPSPGDV WTWRVGRRVT ATGFHQDRFL ILPQRLQQKN VPKSFASKPT LARYIQTSFP GMDADAFFAS FSWKIPALFQ PANKVDAASL
201: FEETPNEVQT ESALNDENAK EGNSRYSQRK RNPMPTYDLV EETKPKANKK KKGATTPATG TQSSTKPKPS RQSGRRSSNQ QNGGAVDLNN LNEEGEPNTS
301: GGRRKKRRAN VEEEEDVSIP HIYVSPMNGV LAVSHEPIDV DPVEFDSYLN SLENLLHESQ EDAARESSSS VLVTSSSPMR EYEWAEARMK ISSLLEKDLP
401: TLFGSKDAAE IAALATKLRK DPNLSAEEIV RLKLIEEISK FSEVFQENKS VIEEADLFFS ALELNKAKVA SLKYEYSDLR HKLGSIQMEV DENSEAIRQI
501: DDKISQLQAR RNELKRYTGS KEKEKVDLSY GQKMVANSIP KVVKEVQSAN SKKHEWECKK DNALKREEEI LSKFTPLKGF FL
101: FSTGQGLPYA PVDWPSPGDV WTWRVGRRVT ATGFHQDRFL ILPQRLQQKN VPKSFASKPT LARYIQTSFP GMDADAFFAS FSWKIPALFQ PANKVDAASL
201: FEETPNEVQT ESALNDENAK EGNSRYSQRK RNPMPTYDLV EETKPKANKK KKGATTPATG TQSSTKPKPS RQSGRRSSNQ QNGGAVDLNN LNEEGEPNTS
301: GGRRKKRRAN VEEEEDVSIP HIYVSPMNGV LAVSHEPIDV DPVEFDSYLN SLENLLHESQ EDAARESSSS VLVTSSSPMR EYEWAEARMK ISSLLEKDLP
401: TLFGSKDAAE IAALATKLRK DPNLSAEEIV RLKLIEEISK FSEVFQENKS VIEEADLFFS ALELNKAKVA SLKYEYSDLR HKLGSIQMEV DENSEAIRQI
501: DDKISQLQAR RNELKRYTGS KEKEKVDLSY GQKMVANSIP KVVKEVQSAN SKKHEWECKK DNALKREEEI LSKFTPLKGF FL
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.