Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037070.1-P | Field mustard | nucleus | 99.04 | 99.04 |
| CDY06487 | Canola | nucleus | 89.06 | 86.09 |
| AT4G14840.1 | Thale cress | nucleus | 71.78 | 67.39 |
| CDX92945 | Canola | nucleus | 62.76 | 57.67 |
| CDY24312 | Canola | nucleus | 62.76 | 57.47 |
| CDX98211 | Canola | nucleus | 64.68 | 57.31 |
| CDY34248 | Canola | nucleus | 63.34 | 55.84 |
| CDY10650 | Canola | nucleus | 61.61 | 55.15 |
| CDY10289 | Canola | nucleus | 62.0 | 54.56 |
| CDY38302 | Canola | nucleus | 63.15 | 47.75 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 34.93 | 33.83 |
| KRH76186 | Soybean | nucleus | 27.06 | 30.92 |
| KRH76190 | Soybean | nucleus | 27.06 | 30.92 |
| KRG90260 | Soybean | nucleus | 27.26 | 30.21 |
| PGSC0003DMT400082110 | Potato | nucleus | 28.6 | 30.1 |
| Solyc09g082130.2.1 | Tomato | nucleus | 23.03 | 28.99 |
| KRH65951 | Soybean | plastid | 18.23 | 27.54 |
| KRH33505 | Soybean | nucleus | 27.06 | 24.52 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 19.19 | 22.57 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 15.16 | 15.86 |
| CDY47288 | Canola | cytosol | 14.01 | 15.5 |
| CDY10107 | Canola | cytosol | 13.82 | 15.29 |
| Os03t0747200-01 | Rice | cytosol | 12.09 | 13.94 |
| HORVU5Hr1G094660.1 | Barley | plastid | 11.32 | 13.05 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 14.59 | 10.89 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 14.59 | 10.89 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 14.2 | 10.6 |
| EER90880 | Sorghum | cytosol | 13.82 | 10.48 |
| Zm00001d034000_P002 | Maize | cytosol | 13.82 | 10.4 |
Protein Annotations
| EnsemblPlants:CDY08296 | EnsemblPlantsGene:GSBRNA2T00125635001 | Gene3D:1.20.5.340 | ncoils:Coil | PANTHER:PTHR33345 | PANTHER:PTHR33345:SF3 |
| ProteinID:CDY08296 | ProteinID:CDY08296.1 | SEG:seg | UniParc:UPI0004EE7A93 | UniProt:A0A078F4G9 | MapMan:35.2 |
Description
BnaA05g13230DBnaA05g13230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4G9]
Coordinates
chrLK031984:+:735281..737321
Molecular Weight (calculated)
58785.0 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.743
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRFDGEQVP VSNHNFWENT LFDGDDHVKR SSFTPGETDL NQLPAIPPVS SGQGLPFAPV DFPSPGDVWT WRVGRRVSAT GFHKDRFLIL PERLKMKNAP
101: KSFASKNTLS RYLETNFPEM DVNAFFASFS WNIPALFQPS ADRVDAASLF EETNKEGENV EDGKNEGSTS RYSQRKRKQV QTQTYEPLQV KPKAIGRKAT
201: KQKPSSSSRR STRQKQGDVV DLEAEEEEEE NEAAATKPGN RMKKRRGSTA EKQEDALIPH VYVSPMNGVL AVSHSPVEIN PEEFDNYLNT LENLLQQQPS
301: QAGHESSSSL PVSASSPVKE YEWAEARMKL SSLLDKDFSS LLMSNEAAEL AALATKLKKD PSLSAEEIVR LKLIEEIPTF SQVFQENKNV IVEADRFFSA
401: LELNKAKVAS LKYEYSDLKD KLGNIQTDVD ANSETIRQID DQIAQLQARR TELTRCISKK EKERVDLSYG QKMVANSIPK VVQEVQAANS KKPEWEMKKE
501: NAVKREEEIL NKFASLKGFY L
101: KSFASKNTLS RYLETNFPEM DVNAFFASFS WNIPALFQPS ADRVDAASLF EETNKEGENV EDGKNEGSTS RYSQRKRKQV QTQTYEPLQV KPKAIGRKAT
201: KQKPSSSSRR STRQKQGDVV DLEAEEEEEE NEAAATKPGN RMKKRRGSTA EKQEDALIPH VYVSPMNGVL AVSHSPVEIN PEEFDNYLNT LENLLQQQPS
301: QAGHESSSSL PVSASSPVKE YEWAEARMKL SSLLDKDFSS LLMSNEAAEL AALATKLKKD PSLSAEEIVR LKLIEEIPTF SQVFQENKNV IVEADRFFSA
401: LELNKAKVAS LKYEYSDLKD KLGNIQTDVD ANSETIRQID DQIAQLQARR TELTRCISKK EKERVDLSYG QKMVANSIPK VVQEVQAANS KKPEWEMKKE
501: NAVKREEEIL NKFASLKGFY L
001: MDMDQEIGQN SPGFDGESVV SMSNRSKETE PVPVENDYYR ENGFNSDGDG DDVKVNGDRS SFTDLNQLPA IPPASSGQGL PFAPVDFPSP GDVWTWRVGR
101: RVNNAGFHKD RLLILPERLK GKNVPKSFAS KNTLSRYLET SFPDMDANAF FASFTWNIPA LFQPAERVDA ASLFEETSKE GQNQDEDAED VKKEGSTSRY
201: SQRKRKQVQI QTNEPKATPR ASNRKKTATT TPAAEHKSAR ESSSKRYTRQ QQGDVFDLTE ENKESDAKKG SKRMKKRRGN YADEEEEEEA FVPHIYVSSM
301: NGVIAVSHPP VDINPEEFDS YLNSLENLLQ QQPSEAGQES SSSLPVSASS PVRDYEWTEA RMKLSSLLEK DFSSLFMSNE ATEMASLAAK LKKDPSLSAE
401: EIVRLKLIEE IPTFSEVFQE NQSMIVEADR FFSALELNKA KVASLKYEYS DLKDKLGNIQ TEVDRNSETI RQIDEQIAQL QAKRTELTRC ISNKGKEKVD
501: LIFGQKMVAN SIPKVVQEVQ AANLKKPEWE MKKDNALKRE SEILNKFAPL KGFYL
101: RVNNAGFHKD RLLILPERLK GKNVPKSFAS KNTLSRYLET SFPDMDANAF FASFTWNIPA LFQPAERVDA ASLFEETSKE GQNQDEDAED VKKEGSTSRY
201: SQRKRKQVQI QTNEPKATPR ASNRKKTATT TPAAEHKSAR ESSSKRYTRQ QQGDVFDLTE ENKESDAKKG SKRMKKRRGN YADEEEEEEA FVPHIYVSSM
301: NGVIAVSHPP VDINPEEFDS YLNSLENLLQ QQPSEAGQES SSSLPVSASS PVRDYEWTEA RMKLSSLLEK DFSSLFMSNE ATEMASLAAK LKKDPSLSAE
401: EIVRLKLIEE IPTFSEVFQE NQSMIVEADR FFSALELNKA KVASLKYEYS DLKDKLGNIQ TEVDRNSETI RQIDEQIAQL QAKRTELTRC ISNKGKEKVD
501: LIFGQKMVAN SIPKVVQEVQ AANLKKPEWE MKKDNALKRE SEILNKFAPL KGFYL
Arabidopsis Description
At4g14840 [Source:UniProtKB/TrEMBL;Acc:O23339]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.