Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10650 | Canola | nucleus | 86.99 | 88.49 |
| CDX98211 | Canola | nucleus | 77.2 | 77.72 |
| CDY34248 | Canola | nucleus | 76.18 | 76.31 |
| CDY38302 | Canola | nucleus | 85.3 | 73.29 |
| CDY24312 | Canola | nucleus | 69.93 | 72.76 |
| AT3G22520.1 | Thale cress | nucleus | 72.8 | 71.83 |
| CDX92945 | Canola | nucleus | 68.07 | 71.08 |
| CDY06487 | Canola | nucleus | 56.59 | 62.15 |
| CDY08296 | Canola | nucleus | 54.56 | 62.0 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 29.56 | 32.53 |
| KRH76190 | Soybean | nucleus | 24.32 | 31.58 |
| KRH76186 | Soybean | nucleus | 24.32 | 31.58 |
| PGSC0003DMT400082110 | Potato | nucleus | 25.51 | 30.51 |
| KRG90260 | Soybean | nucleus | 23.99 | 30.21 |
| KRH65951 | Soybean | plastid | 16.89 | 28.99 |
| Solyc09g082130.2.1 | Tomato | nucleus | 20.1 | 28.74 |
| KRH33505 | Soybean | nucleus | 25.34 | 26.09 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 15.54 | 20.77 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 13.51 | 16.06 |
| CDY47288 | Canola | cytosol | 12.5 | 15.71 |
| CDY10107 | Canola | cytosol | 12.16 | 15.29 |
| HORVU5Hr1G094660.1 | Barley | plastid | 11.66 | 15.27 |
| Os03t0747200-01 | Rice | cytosol | 11.49 | 15.04 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 15.71 | 13.32 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 15.37 | 13.04 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 15.2 | 12.89 |
| Zm00001d034000_P002 | Maize | cytosol | 15.03 | 12.86 |
| EER90880 | Sorghum | cytosol | 14.36 | 12.37 |
Protein Annotations
| EnsemblPlants:CDY10289 | EnsemblPlantsGene:GSBRNA2T00032134001 | ncoils:Coil | PANTHER:PTHR33345 | PANTHER:PTHR33345:SF3 | ProteinID:CDY10289 |
| ProteinID:CDY10289.1 | SEG:seg | UniParc:UPI0004EE8BF9 | UniProt:A0A078FB96 | MapMan:35.2 | : |
Description
BnaC05g29900DBnaC05g29900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB96]
Coordinates
chrLK032002:+:105000..108073
Molecular Weight (calculated)
66851.8 Da
IEP (calculated)
5.605
GRAVY (calculated)
-0.847
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAPFYSPID MHQQIHGQTP PGFDTEPVPN STYQDTEPVP LSTYRENEPD PFHATQQEKD DFWNNGFNRE EPESFQPKEN GKRSVDNNSS FTHGETDLNQ
101: LPAIPQFSTG QGLPYAPIDW PSPGDVWTWR VGRRVTATGF HQDRFLILPQ RLQQKNVPKS FASKPTLARY IQTGFPGMDA DAFFASFSWK IPALFQPANK
201: VDAASLFEET PKEVQTEAAL NDENAKEGNS RYSQRKRNPM PTYDHVEEPK PKATPRGSGN KKKKGATTPA TGTQSSTKPK PSRQSGRRSS NHQNGGAVDL
301: NNLNEEGEPN TCGRRKKRRA NFEEEEDVSI PHIYVSPMNG VLAVSHEPID VDPIEFDSYL NSLENLLHES QEDAARESSS VLVTASSPMK EYEWAEARMK
401: ISSLLEKDLP TLFVSKDAAE IAALATKLRK DPNLSAEEIV RLKLIEEIQT FSEVFQENKS VIEEADWFFS ALELNKAKVA SLKYEYSDLR HKLGSIQVEV
501: DENSEAIRQI DDQIGQLQAR RNELKRYIGS KEKEKVDLSY GQKMVANSIP KVVQEVQSAN SKKHEWECKK DNALKREAEI LSKFTPLKGF FL
101: LPAIPQFSTG QGLPYAPIDW PSPGDVWTWR VGRRVTATGF HQDRFLILPQ RLQQKNVPKS FASKPTLARY IQTGFPGMDA DAFFASFSWK IPALFQPANK
201: VDAASLFEET PKEVQTEAAL NDENAKEGNS RYSQRKRNPM PTYDHVEEPK PKATPRGSGN KKKKGATTPA TGTQSSTKPK PSRQSGRRSS NHQNGGAVDL
301: NNLNEEGEPN TCGRRKKRRA NFEEEEDVSI PHIYVSPMNG VLAVSHEPID VDPIEFDSYL NSLENLLHES QEDAARESSS VLVTASSPMK EYEWAEARMK
401: ISSLLEKDLP TLFVSKDAAE IAALATKLRK DPNLSAEEIV RLKLIEEIQT FSEVFQENKS VIEEADWFFS ALELNKAKVA SLKYEYSDLR HKLGSIQVEV
501: DENSEAIRQI DDQIGQLQAR RNELKRYIGS KEKEKVDLSY GQKMVANSIP KVVQEVQSAN SKKHEWECKK DNALKREAEI LSKFTPLKGF FL
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.