Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023822.1-P | Field mustard | nucleus | 97.97 | 98.14 |
| CDX98211 | Canola | nucleus | 93.06 | 93.54 |
| CDY10289 | Canola | nucleus | 76.31 | 76.18 |
| CDY24312 | Canola | nucleus | 73.1 | 75.92 |
| CDY10650 | Canola | nucleus | 74.11 | 75.26 |
| CDX92945 | Canola | nucleus | 71.57 | 74.6 |
| AT3G22520.1 | Thale cress | nucleus | 70.56 | 69.5 |
| CDY06487 | Canola | nucleus | 58.21 | 63.82 |
| CDY08296 | Canola | nucleus | 55.84 | 63.34 |
| CDY38302 | Canola | nucleus | 73.1 | 62.7 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 29.44 | 32.34 |
| KRH76186 | Soybean | nucleus | 24.7 | 32.02 |
| KRH76190 | Soybean | nucleus | 24.7 | 32.02 |
| PGSC0003DMT400082110 | Potato | nucleus | 26.23 | 31.31 |
| KRG90260 | Soybean | nucleus | 24.37 | 30.64 |
| Solyc09g082130.2.1 | Tomato | nucleus | 21.32 | 30.43 |
| KRH65951 | Soybean | plastid | 16.41 | 28.12 |
| KRH33505 | Soybean | nucleus | 25.55 | 26.26 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 16.41 | 21.9 |
| CDY47288 | Canola | cytosol | 12.52 | 15.71 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 13.2 | 15.66 |
| CDY10107 | Canola | cytosol | 12.35 | 15.5 |
| Os03t0747200-01 | Rice | cytosol | 10.83 | 14.16 |
| HORVU5Hr1G094660.1 | Barley | plastid | 10.66 | 13.94 |
| Zm00001d034000_P002 | Maize | cytosol | 15.4 | 13.15 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 15.23 | 12.89 |
| EER90880 | Sorghum | cytosol | 14.72 | 12.66 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 14.89 | 12.61 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 14.72 | 12.46 |
Protein Annotations
| EnsemblPlants:CDY34248 | EnsemblPlantsGene:GSBRNA2T00056265001 | ncoils:Coil | PANTHER:PTHR33345 | PANTHER:PTHR33345:SF3 | ProteinID:CDY34248 |
| ProteinID:CDY34248.1 | SEG:seg | UniParc:UPI0004EF0B14 | UniProt:A0A078HBT3 | MapMan:35.2 | : |
Description
BnaA01g24650DBnaA01g24650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBT3]
Coordinates
chrLK032331:-:283827..286455
Molecular Weight (calculated)
66183.4 Da
IEP (calculated)
5.104
GRAVY (calculated)
-0.809
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPFYSPTN MQQDIGQSPP GFDNEPVPVS TYQDTEPVPL STYHENEPNG NQPEATQQEL DDFWENGFNR EEAIQEPKEN GKRRSVDNTS FAPGETDLNQ
101: LPPIPPVSTG QGPPYAPVDW PSPGDVWTWR VGRRVTALGF HQDRFLILPQ RLQQRNVPKS FASKPALARY IQMSFPEMDA DAFFASFSWK IPALFQPADK
201: VDDAASLFEE TPKEVKTEGA APSDKEGNSR YSQRKRNPMP TFESVVEKPK ATKKKKGAKT PGTTTGPQSS TKPKPSRQSS RRSSNQQSGG AVELNLQSEE
301: EGGGGPASAP NTSGRRKKRR VNVEEEDVSI PHIYVSPMNG VLAVSHEPID VDPIEFDSYL NSLENLLHQG PEDAGTESSV LVRASSPMRE YEWAEARMKI
401: SSLLEKDFPT LFTSKDAAEI AALATKLRKD PNLSAEEIVR LKLMEEIPTF SEVFQENKAV IEEADRFFSA LELNKAKVAS LKYEYSDLKH KLGSIQIEVD
501: ENSEAIRQID EQMAQLQARR NELKKYIGSK EKEKVDLSYG QKMVANSIPK VVQEVQAANS KKPEWECKKE NALKREEEIL SKFNPLKGFF L
101: LPPIPPVSTG QGPPYAPVDW PSPGDVWTWR VGRRVTALGF HQDRFLILPQ RLQQRNVPKS FASKPALARY IQMSFPEMDA DAFFASFSWK IPALFQPADK
201: VDDAASLFEE TPKEVKTEGA APSDKEGNSR YSQRKRNPMP TFESVVEKPK ATKKKKGAKT PGTTTGPQSS TKPKPSRQSS RRSSNQQSGG AVELNLQSEE
301: EGGGGPASAP NTSGRRKKRR VNVEEEDVSI PHIYVSPMNG VLAVSHEPID VDPIEFDSYL NSLENLLHQG PEDAGTESSV LVRASSPMRE YEWAEARMKI
401: SSLLEKDFPT LFTSKDAAEI AALATKLRKD PNLSAEEIVR LKLMEEIPTF SEVFQENKAV IEEADRFFSA LELNKAKVAS LKYEYSDLKH KLGSIQIEVD
501: ENSEAIRQID EQMAQLQARR NELKKYIGSK EKEKVDLSYG QKMVANSIPK VVQEVQAANS KKPEWECKKE NALKREEEIL SKFNPLKGFF L
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.