Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001870.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 90.65 | 92.28 |
| CDY24312 | Canola | nucleus | 83.25 | 82.95 |
| CDX98211 | Canola | nucleus | 76.54 | 73.81 |
| CDY34248 | Canola | nucleus | 74.6 | 71.57 |
| CDY10650 | Canola | nucleus | 70.37 | 68.56 |
| CDY10289 | Canola | nucleus | 71.08 | 68.07 |
| AT3G22520.1 | Thale cress | nucleus | 68.78 | 65.0 |
| CDY08296 | Canola | nucleus | 57.67 | 62.76 |
| CDY06487 | Canola | nucleus | 58.02 | 61.04 |
| CDY38302 | Canola | nucleus | 69.84 | 57.47 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 29.45 | 31.04 |
| KRG90260 | Soybean | nucleus | 25.4 | 30.64 |
| PGSC0003DMT400082110 | Potato | nucleus | 26.28 | 30.1 |
| KRH76186 | Soybean | nucleus | 24.16 | 30.04 |
| KRH76190 | Soybean | nucleus | 24.16 | 30.04 |
| Solyc09g082130.2.1 | Tomato | nucleus | 21.16 | 28.99 |
| KRH65951 | Soybean | plastid | 17.64 | 28.99 |
| KRH33505 | Soybean | nucleus | 25.93 | 25.57 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 16.75 | 21.44 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 13.58 | 15.46 |
| HORVU5Hr1G094660.1 | Barley | plastid | 11.99 | 15.04 |
| CDY47288 | Canola | cytosol | 12.17 | 14.65 |
| CDY10107 | Canola | cytosol | 11.99 | 14.44 |
| Os03t0747200-01 | Rice | cytosol | 11.29 | 14.16 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 14.99 | 12.18 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 14.99 | 12.18 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 14.81 | 12.03 |
| Zm00001d034000_P002 | Maize | cytosol | 14.29 | 11.71 |
| EER90880 | Sorghum | cytosol | 13.76 | 11.35 |
Protein Annotations
| EnsemblPlants:CDX92945 | EnsemblPlantsGene:GSBRNA2T00154813001 | ncoils:Coil | PANTHER:PTHR33345 | PANTHER:PTHR33345:SF3 | ProteinID:CDX92945 |
| ProteinID:CDX92945.1 | SEG:seg | UniParc:UPI0004EE49D8 | MapMan:35.2 | : | : |
Description
BnaA03g36670D
Coordinates
chrLK031874:+:215549..217804
Molecular Weight (calculated)
64096.3 Da
IEP (calculated)
6.876
GRAVY (calculated)
-0.743
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAPFYSPID MQQGISHTPL GSITLLFSFF NANLHVSTYR DTEPVPLSTY RENDNLWENG FNREQTIEEP EPKENGKRSV DKSSFTHGET DLNQLPAIPP
101: ASTGQGLPYA PVDWPSFGDV WTWRVGKRVT ATGYHHDRFL ILPQRLQQKN VPKSFASKQT LLRYFQSNFP GMDADAFFAS FSWKVPALFQ PANKVDAASL
201: FEETPKEVKT EGNSRYSQRK RNPMPLEANA KAAQRGGTSS NKKKKGGVTT TPTTGWKSTR RDSNQQRGGA VYHLNEEEEE GEPTTGPNTS GRRKKRRVNL
301: KEEEEEDVSI PHIYVSPMNG VLAVSHEPID VDPVEFDSYL NSLDSLLHQG PQDASVLVSA SSPMREYEWA EARMKISSLL EKDFPTLFTS KDAAEIAALA
401: AKLRKDPNLS AEEMVRLKLM QEMPTFSEVF QENKTVIDEA DRFFSALELN KAKVASLKYE YSDLRHKLGS IQTEVDENSE GIRRIDDQIA QLQARRNELK
501: RCIGSKEKEK VDLSYGKKMV ANSIPKVVQD VQAANSKKPE WECKKENALK REEEILSKFT PLRGFFL
101: ASTGQGLPYA PVDWPSFGDV WTWRVGKRVT ATGYHHDRFL ILPQRLQQKN VPKSFASKQT LLRYFQSNFP GMDADAFFAS FSWKVPALFQ PANKVDAASL
201: FEETPKEVKT EGNSRYSQRK RNPMPLEANA KAAQRGGTSS NKKKKGGVTT TPTTGWKSTR RDSNQQRGGA VYHLNEEEEE GEPTTGPNTS GRRKKRRVNL
301: KEEEEEDVSI PHIYVSPMNG VLAVSHEPID VDPVEFDSYL NSLDSLLHQG PQDASVLVSA SSPMREYEWA EARMKISSLL EKDFPTLFTS KDAAEIAALA
401: AKLRKDPNLS AEEMVRLKLM QEMPTFSEVF QENKTVIDEA DRFFSALELN KAKVASLKYE YSDLRHKLGS IQTEVDENSE GIRRIDDQIA QLQARRNELK
501: RCIGSKEKEK VDLSYGKKMV ANSIPKVVQD VQAANSKKPE WECKKENALK REEEILSKFT PLRGFFL
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.