Factsheet for PGSC0003DMT400082110

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g082130.2.1	Tomato	nucleus	64.04	76.57
PGSC0003DMT400090844	Potato	cytosol	9.09	37.5
VIT_05s0020g03590.t01	Wine grape	nucleus	35.96	33.09
Bra037070.1-P	Field mustard	nucleus	30.1	28.6
CDY08296	Canola	nucleus	30.1	28.6
KRH76186	Soybean	nucleus	25.45	27.63
KRH76190	Soybean	nucleus	25.45	27.63
Bra001870.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.71	27.29
CDY06487	Canola	nucleus	29.49	27.09
KRG90260	Soybean	nucleus	25.45	26.81
CDX98211	Canola	nucleus	31.31	26.36
CDX92945	Canola	nucleus	30.1	26.28
Bra023822.1-P	Field mustard	nucleus	31.31	26.27
CDY34248	Canola	nucleus	31.31	26.23
CDY10650	Canola	nucleus	30.71	26.12
AT4G14840.1	Thale cress	nucleus	29.09	25.95
KRH65951	Soybean	plastid	17.78	25.51
CDY10289	Canola	nucleus	30.51	25.51
CDY24312	Canola	nucleus	29.29	25.48
AT3G22520.1	Thale cress	nucleus	30.51	25.17
Bra039958.1-P	Field mustard	nucleus	30.1	25.08
VIT_12s0035g02120.t01	Wine grape	nucleus	21.62	24.15
KRH33505	Soybean	nucleus	26.06	22.43
CDY38302	Canola	nucleus	30.71	22.06
PGSC0003DMT400059456	Potato	cytosol	14.95	20.9
PGSC0003DMT400082107	Potato	cytosol	17.58	18.67
PGSC0003DMT400077583	Potato	nucleus	14.75	17.98
VIT_17s0000g05270.t01	Wine grape	nucleus	15.15	17.36
PGSC0003DMT400077585	Potato	cytosol	6.67	17.01
GSMUA_Achr7P27170_001	Banana	cytosol	15.76	15.66
PGSC0003DMT400092399	Potato	cytosol	7.27	15.32
HORVU5Hr1G094660.1	Barley	plastid	12.73	13.94
Os03t0747200-01	Rice	cytosol	12.12	13.27
TraesCS5B01G390300.3	Wheat	cytosol	15.96	11.32
TraesCS5D01G395300.2	Wheat	cytosol, nucleus, plastid	15.76	11.17
Zm00001d034000_P002	Maize	cytosol	15.35	10.98
TraesCS5A01G385300.3	Wheat	cytosol	15.35	10.89
EER90880	Sorghum	cytosol	14.95	10.77
PGSC0003DMT400017291	Potato	cytosol, peroxisome, plastid	3.03	8.67
PGSC0003DMT400077587	Potato	nucleus	7.47	7.49
PGSC0003DMT400041923	Potato	cytosol	2.22	7.19

Protein Annotations

EnsemblPlants:PGSC0003DMT400082110	EnsemblPlantsGene:PGSC0003DMG400032263	EntrezGene:102604673	ncoils:Coil	PANTHER:PTHR33345	PANTHER:PTHR33345:SF3
PGSC:PGSC0003DMG400032263	RefSeq:XP_006360784.1	SEG:seg	UniParc:UPI000296651F	UniProt:M1D5N0	MapMan:35.2

Description

Calmodulin protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400032263]

Coordinates

chr9:+:53851661..53859271

Molecular Weight (calculated)

54974.2 Da

IEP (calculated)

8.401

GRAVY (calculated)

-0.597

Length

495 amino acids

Sequence
(BLAST)

001: MEGGEKISTS EANDTCMTDG FQLRPVALLE SGEGLPYAPE NWPNPGDIWT WKVGRRVKAS GYFQDRYLIA PPRLQETPRK KMWFLSKLSL KTYLKTNYPE
101: ADTNAFFSSF VWEVPADFNA FFTSPEGKAE PLPISQSPNP GNAHKTGQSP NSGKARKTGK SANSGKVRKT GEGGGTSSRK RKPNMKQEGR YLWKKVNSNI
201: TNTEVSNALL VKEESIENNE APNKVQSSLF ESPVSDDNAA ISPLACHQEL ETPLKDSPLA VTPEDFDNYI SSLDDILHLP IHGSPSIISG SCGEKEMTGA
301: RKKLVNLLRI GFPALFTSDR LTEVATLSLE LQNEPNLSDR ELSMLKLIQE IPLASKDFLE AKQVTKQGDK FFADLEAKVT RVSTLRDDYN ASKKEIALLE
401: VEDMSTSSAI QEIDDKIAIL QSRRAALAKV SNRTNKKIAE AKSKQRMVMD HLPKMVDEIQ VANSETSEWK LKKQKSAEKE VEILTKFAPL KGFSI

Best Arabidopsis Sequence Match ( AT3G22520.1 )
(BLAST)

001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL

Arabidopsis Description

Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.