Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10650 | Canola | nucleus | 91.25 | 93.13 |
| Bra023822.1-P | Field mustard | nucleus | 75.08 | 75.59 |
| AT3G22520.1 | Thale cress | nucleus | 72.56 | 71.83 |
| Bra001870.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 66.5 | 70.92 |
| Bra037070.1-P | Field mustard | nucleus | 54.38 | 62.0 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 28.79 | 31.78 |
| KRH76190 | Soybean | nucleus | 23.74 | 30.92 |
| KRH76186 | Soybean | nucleus | 23.74 | 30.92 |
| PGSC0003DMT400082110 | Potato | nucleus | 25.08 | 30.1 |
| KRG90260 | Soybean | nucleus | 23.06 | 29.15 |
| KRH65951 | Soybean | plastid | 16.5 | 28.41 |
| Solyc09g082130.2.1 | Tomato | nucleus | 19.7 | 28.26 |
| KRH33505 | Soybean | nucleus | 24.07 | 24.87 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 15.32 | 20.54 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 13.3 | 15.86 |
| Bra015422.1-P | Field mustard | cytosol | 12.46 | 15.78 |
| Os03t0747200-01 | Rice | cytosol | 11.95 | 15.71 |
| HORVU5Hr1G094660.1 | Barley | plastid | 11.62 | 15.27 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 15.82 | 13.47 |
| Zm00001d034000_P002 | Maize | cytosol | 15.49 | 13.29 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 15.49 | 13.18 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 15.32 | 13.04 |
| EER90880 | Sorghum | cytosol | 14.81 | 12.81 |
Protein Annotations
Description
AT3G22520 (E=7e-259) | unknown protein
Coordinates
chrA05:-:15408464..15410815
Molecular Weight (calculated)
66877.8 Da
IEP (calculated)
5.623
GRAVY (calculated)
-0.851
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAPFYSSID IHQQQIGQTP PGFDAEPVPV STYQDTEPVP LSTYREAEPD PFHATQQEKD DFWNNGFNRE EPESFQRKEN GKRSVDHNSS FTHGETDLNQ
101: LPAIPQFSTG QGLPYAPVDW PSSGDVWTWR VGRRVTATGF HQDRFLILPQ RLQQKNVPKS FASKPTLARY IQTSFPGMDA DGFFASFSWK IPALFQPANK
201: VDAASLFEET PKEVQTEAAL NDENAKEGNS RYSQRKRNPM PTYDPVEEPK PKPTPRGSGN KKKKGATTPA TGTQSSTKPK PSRQSGRRSA NHQNGGAVDL
301: NNLNEEGEPN TSGGRRKKRR ANFEEEEDVS IPHIYVSPMN GVLAVSHEPI DVDPVEFDSY LNSLENLLHE SQEDAARESS SSVLVTASSP MREYEWAEAR
401: MKISSLLEKD LPTLFGSKDA AEIAALATKL RKDPNLSAEE IVRLKLIEEI SKFSEVFQEN KSVIEEADVF FSALELNKAK VASLKYEYSD LRHKLGSIQM
501: EVDENSEAIR QIDDQISQLQ ARRNELKRYT GSKEKEKVDL SYGQKMVANS IPKVVQEVQS ANSKKHEWEC KKDNALKREE EILSKFTPLK GFFL
101: LPAIPQFSTG QGLPYAPVDW PSSGDVWTWR VGRRVTATGF HQDRFLILPQ RLQQKNVPKS FASKPTLARY IQTSFPGMDA DGFFASFSWK IPALFQPANK
201: VDAASLFEET PKEVQTEAAL NDENAKEGNS RYSQRKRNPM PTYDPVEEPK PKPTPRGSGN KKKKGATTPA TGTQSSTKPK PSRQSGRRSA NHQNGGAVDL
301: NNLNEEGEPN TSGGRRKKRR ANFEEEEDVS IPHIYVSPMN GVLAVSHEPI DVDPVEFDSY LNSLENLLHE SQEDAARESS SSVLVTASSP MREYEWAEAR
401: MKISSLLEKD LPTLFGSKDA AEIAALATKL RKDPNLSAEE IVRLKLIEEI SKFSEVFQEN KSVIEEADVF FSALELNKAK VASLKYEYSD LRHKLGSIQM
501: EVDENSEAIR QIDDQISQLQ ARRNELKRYT GSKEKEKVDL SYGQKMVANS IPKVVQEVQS ANSKKHEWEC KKDNALKREE EILSKFTPLK GFFL
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.