Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:
  • nucleus 3
  • plastid 1
  • cytosol 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92945 Canola nucleus 92.28 90.65
Bra023822.1-P Field mustard nucleus 73.07 68.98
Bra039958.1-P Field mustard nucleus 70.92 66.5
AT3G22520.1 Thale cress nucleus 69.66 64.67
Bra037070.1-P Field mustard nucleus 58.53 62.57
VIT_05s0020g03590.t01 Wine grape nucleus 30.7 31.78
PGSC0003DMT400082110 Potato nucleus 27.29 30.71
KRH76186 Soybean nucleus 24.96 30.48
KRH76190 Soybean nucleus 24.96 30.48
KRG90260 Soybean nucleus 25.67 30.43
Solyc09g082130.2.1 Tomato nucleus 21.9 29.47
KRH65951 Soybean plastid 17.95 28.99
KRH33505 Soybean nucleus 26.21 25.39
VIT_12s0035g02120.t01 Wine grape nucleus 17.41 21.9
GSMUA_Achr7P27170_001 Banana cytosol 13.82 15.46
Bra015422.1-P Field mustard cytosol 12.57 14.93
HORVU5Hr1G094660.1 Barley plastid 11.85 14.6
Os03t0747200-01 Rice cytosol 11.49 14.16
TraesCS5A01G385300.3 Wheat cytosol 15.26 12.18
TraesCS5D01G395300.2 Wheat cytosol, nucleus, plastid 15.26 12.18
TraesCS5B01G390300.3 Wheat cytosol 15.08 12.03
Zm00001d034000_P002 Maize cytosol 14.36 11.56
EER90880 Sorghum cytosol 14.18 11.5
Protein Annotations
EnsemblPlants:Bra001870.1EnsemblPlants:Bra001870.1-PEnsemblPlantsGene:Bra001870ncoils:CoilPANTHER:PTHR33345PANTHER:PTHR33345:SF3
SEG:segUniParc:UPI00025406C8UniProt:M4CCE0MapMan:35.2::
Description
AT3G22520 (E=4e-224) | unknown protein
Coordinates
chrA03:+:19078085..19080068
Molecular Weight (calculated)
62957.2 Da
IEP (calculated)
7.088
GRAVY (calculated)
-0.726
Length
557 amino acids
Sequence
(BLAST)
001: MQQGISHTPL GSITLLFSFF NANLHVSTYR DTEPVPLSTY RENDNLWENG FNREQTIEEP EAKENGKRSV DKSSFPHGET DLNQLPAIPP ASTGQGLPYA
101: PVDWPSFGDV WTWRVGKRVT ATGYHHDRLL ILPQRLQQKN VPKSFASKQT LLRYFQSNFP GMDADAFFAS FSWKVPALFQ PANKVDAASL FEETPKEVKT
201: EGNSRYSQRK RNSMPVESNA KAAQRGGSSS NKKKKGGVTT TPTTGWKSTR RGSNQQRGGA VYHLNEEEEE GEPITGPNTS GRRKKRRVNL KEEEEEDVSI
301: PHIYVSPMNG VLAVSHEPID VDPVEFDSYL NSLDILLHQG PEDASVLVTA SSPMREYEWA EARMKISSLL EKDFPTLFTS KDAAEIAALA TKLRKDPNLS
401: AEEMVRLKLM QEMPTFSEVF QENKMVIEEA DRFFSALELN KAKVASLKYE YSDLRHKLGS IQTEVDENSE GIRRIDDQIA QLQARRTELK RCIGSKEKEK
501: VDLSYGKKMV ANSIPKVVQD VQAANSKKPE WECKKENALK REEEILSKFT PLRGFFL
Best Arabidopsis Sequence Match ( AT3G22520.1 )
(BLAST)
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.