Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10650 | Canola | nucleus | 72.13 | 85.4 |
| CDY10289 | Canola | nucleus | 73.29 | 85.3 |
| CDX98211 | Canola | nucleus | 64.44 | 75.51 |
| CDY34248 | Canola | nucleus | 62.7 | 73.1 |
| AT3G22520.1 | Thale cress | nucleus | 62.41 | 71.67 |
| CDY24312 | Canola | nucleus | 58.64 | 71.0 |
| CDX92945 | Canola | nucleus | 57.47 | 69.84 |
| CDY08296 | Canola | nucleus | 47.75 | 63.15 |
| CDY06487 | Canola | nucleus | 47.46 | 60.67 |
| VIT_05s0020g03590.t01 | Wine grape | nucleus | 25.25 | 32.34 |
| PGSC0003DMT400082110 | Potato | nucleus | 22.06 | 30.71 |
| KRH76190 | Soybean | nucleus | 20.32 | 30.7 |
| KRH76186 | Soybean | nucleus | 20.32 | 30.7 |
| KRG90260 | Soybean | nucleus | 20.61 | 30.21 |
| Solyc09g082130.2.1 | Tomato | nucleus | 17.85 | 29.71 |
| KRH65951 | Soybean | plastid | 14.51 | 28.99 |
| KRH33505 | Soybean | nucleus | 21.92 | 26.26 |
| VIT_12s0035g02120.t01 | Wine grape | nucleus | 13.79 | 21.44 |
| GSMUA_Achr7P27170_001 | Banana | cytosol | 11.32 | 15.66 |
| CDY47288 | Canola | cytosol | 10.6 | 15.5 |
| Os03t0747200-01 | Rice | cytosol | 10.01 | 15.27 |
| CDY10107 | Canola | cytosol | 10.3 | 15.07 |
| HORVU5Hr1G094660.1 | Barley | plastid | 9.87 | 15.04 |
| TraesCS5D01G395300.2 | Wheat | cytosol, nucleus, plastid | 13.93 | 13.75 |
| TraesCS5A01G385300.3 | Wheat | cytosol | 13.79 | 13.61 |
| TraesCS5B01G390300.3 | Wheat | cytosol | 13.64 | 13.47 |
| EER90880 | Sorghum | cytosol | 13.21 | 13.25 |
| Zm00001d034000_P002 | Maize | cytosol | 13.21 | 13.15 |
Protein Annotations
| EnsemblPlants:CDY38302 | EnsemblPlantsGene:GSBRNA2T00065677001 | ncoils:Coil | PANTHER:PTHR33345 | PANTHER:PTHR33345:SF3 | ProteinID:CDY38302 |
| ProteinID:CDY38302.1 | SEG:seg | UniParc:UPI0004EE87F7 | UniProt:A0A078HKA1 | MapMan:35.2 | : |
Description
BnaC05g29950DBnaC05g29950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKA1]
Coordinates
chrLK032421:-:54736..60220
Molecular Weight (calculated)
77912.2 Da
IEP (calculated)
6.809
GRAVY (calculated)
-0.801
Length
689 amino acids
Sequence
(BLAST)
(BLAST)
001: MANQTAVATV QYMPFSTFVS AGPRDSKMII SQKDMIAYHE HVGEASNSHP PMLDAVTNEF WEHKIVRKSN GADIYRLQRN VKKRDRLGIY KDGFEKEKAC
101: VFKLSHKNLF YSPIDMHNQQ IHGQTPPGFD TEPVPLSTYR EAEPDPFHAT QQEKDDFWSN GFNREEPESF QAKENGKRSV DHNSSFTHGE TDLNQLPAIA
201: QFSTGQGLPY APVDWPSPGD VWTWRVGRRV TATGFHQDRF LILPQRLQQK NVPKSFASKP TLARYIQTNF PGMDADAFFA SFSWKIPALF QPANKVDAAS
301: LFEETPKEVQ TEATAPNDEN AKEGNSRYSQ RKRNPMPTYD HPVEEPKPKA TPRGSGNKKK KGATTPATGT QSSTKPKPSR QSGRRSSNHQ NGGAVDLNNL
401: NKEGEPNTSG RRKKRRANFE EEEDVSIPHI YVSPMNGVLA VSHEPIDVDP IEFDSYLNSL ENLLHESQED AARESSSVLV TASSPMRDYE WAEARMKISS
501: LLEKDLPTLF VSKDAAEIAA LATKLRKDPN LSAEEIVRLK LIEEIPTFSE VFQENKSVIE EADWFFSALE LNKAKVASLK YEYSDLRHKL GSIQVEVDEN
601: SEAIRQIDDQ IGQLQARRNE LKRYVGSKEK EKVDLSYGQK MVANSIPKVV QEVQSANSKK HEWECKKDNA LKCEEEILSK FTPLKGFFL
101: VFKLSHKNLF YSPIDMHNQQ IHGQTPPGFD TEPVPLSTYR EAEPDPFHAT QQEKDDFWSN GFNREEPESF QAKENGKRSV DHNSSFTHGE TDLNQLPAIA
201: QFSTGQGLPY APVDWPSPGD VWTWRVGRRV TATGFHQDRF LILPQRLQQK NVPKSFASKP TLARYIQTNF PGMDADAFFA SFSWKIPALF QPANKVDAAS
301: LFEETPKEVQ TEATAPNDEN AKEGNSRYSQ RKRNPMPTYD HPVEEPKPKA TPRGSGNKKK KGATTPATGT QSSTKPKPSR QSGRRSSNHQ NGGAVDLNNL
401: NKEGEPNTSG RRKKRRANFE EEEDVSIPHI YVSPMNGVLA VSHEPIDVDP IEFDSYLNSL ENLLHESQED AARESSSVLV TASSPMRDYE WAEARMKISS
501: LLEKDLPTLF VSKDAAEIAA LATKLRKDPN LSAEEIVRLK LIEEIPTFSE VFQENKSVIE EADWFFSALE LNKAKVASLK YEYSDLRHKL GSIQVEVDEN
601: SEAIRQIDDQ IGQLQARRNE LKRYVGSKEK EKVDLSYGQK MVANSIPKVV QEVQSANSKK HEWECKKDNA LKCEEEILSK FTPLKGFFL
001: MSAPIYSPID MQEIVQNPPG FDTEPVPIST YRDNEPVPLS TYRENDSDHL DATQQENDDF WENGFSREEA IEDPEPSQAK ENGKRSVDNS AFTHGETDLN
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
101: QLPAIPPVST GQGLPYAPVD WPSPGDVWTW RVGRRVTAMG YHQDRFLILP QRLQQKHVPK SFASKPQLAR YLESDFPGMD ADAFFASFSW KVPALFQPAN
201: KVDAASLFEE TPKEVQTEVG QNDENAQDGK GNSRYSQRKR KPMPTPQTYE PVEAKPKSTP RGSSNKKKKG ATTPATGPQS STKPKPSRQS GRRTSIQQRG
301: GAVDLNFLNE EESEPATAPK TSNKRKKRGV NYEEEDVSIP HIYVSPMNGV LAVSHSPIDV NPEEFDSYLN SLDNLMQQPP EEVGRDSSVL VSVSSPMREY
401: EWAEARMKIS SLLEKDFTTL FLSKDAAEIA ALATKLRKDP NLTAEEIVRL KLMEEIPTFS EVFQENKGVI EEADRFFSAL ELNKAKVASL KYEYSDLKEK
501: LGSIQMEVDT NSETIRQIDD QIAQLQARRS ELKRYIGTKE KERVDLSYGQ KMVANSIPKV VQEVQSANLK KPEWECKKDN ALKREAEILS KFTPLKGFFL
Arabidopsis Description
Spindle assembly abnormal protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ94]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.