Factsheet for Os02t0713400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

extracellular: 24083427
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07372	Sorghum	cytosol, mitochondrion	90.94	90.94
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	90.94	90.94
TraesCS6B01G306300.1	Wheat	cytosol	90.03	89.76
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	89.73	89.46
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	89.43	89.16
Zm00001d017823_P001	Maize	cytosol	90.94	85.51
CDY26806	Canola	cytosol, mitochondrion, peroxisome	30.51	79.53
PGSC0003DMT400048037	Potato	cytosol	78.25	78.96
Solyc03g032000.2.1	Tomato	cytosol, extracellular	77.64	78.35
EES09948	Sorghum	mitochondrion	80.06	78.17
GSMUA_Achr9P27590_001	Banana	mitochondrion	78.85	73.73
Zm00001d053118_P001	Maize	cytosol	77.64	73.64
Bra017711.1-P	Field mustard	cytosol	67.98	72.12
PGSC0003DMT400035477	Potato	mitochondrion	79.46	71.66
Solyc02g082250.2.1	Tomato	mitochondrion	78.85	71.12
CDY22142	Canola	cytosol	16.01	69.74
CDY72417	Canola	cytosol	16.01	69.74
KRH76499	Soybean	nucleus	76.13	68.11
VIT_04s0044g01750.t01	Wine grape	mitochondrion	76.74	67.73
KRH28954	Soybean	nucleus	75.83	67.47
AT4G35460.1	Thale cress	mitochondrion, plastid	76.44	67.47
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	59.21	67.12
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	60.42	67.11
Bra037274.1-P	Field mustard	mitochondrion	67.67	67.07
CDX74655	Canola	peroxisome, plastid	34.74	66.86
CDY41653	Canola	mitochondrion	75.53	66.84
CDY40633	Canola	mitochondrion	73.41	66.76
CDY24812	Canola	mitochondrion	74.92	66.49
CDX72537	Canola	mitochondrion	71.9	66.11
AT2G17420.1	Thale cress	mitochondrion, plastid	76.13	65.8
Bra010533.1-P	Field mustard	mitochondrion	69.79	65.62
CDY07845	Canola	plastid	67.37	64.83
CDY30367	Canola	mitochondrion	67.07	64.72
VIT_05s0049g00110.t01	Wine grape	cytosol	20.54	64.15
Bra025646.1-P	Field mustard	cytosol	14.8	62.82
KRH07823	Soybean	mitochondrion	74.32	62.44
CDY05719	Canola	cytosol	32.02	59.22
CDY58054	Canola	cytosol	18.73	57.94
Bra031685.1-P	Field mustard	cytosol	18.43	57.01
CDX74431	Canola	cytosol	22.05	49.66
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	71.0	45.45
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.69	45.35
CDY13332	Canola	plastid	35.65	43.22
CDY70273	Canola	cytosol, peroxisome	16.62	42.97
CDY26805	Canola	vacuole	19.64	42.76
CDY26807	Canola	cytosol, mitochondrion	72.81	36.46
Os04t0524136-00	Rice	plastid	21.75	36.18
Os07t0657900-02	Rice	plastid	48.64	31.26
Bra025645.1-P	Field mustard	cytosol	19.03	28.25

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EntrezGene:4330505	EMBL:AK071251	ProteinID:BAD07786.1
ProteinID:BAF09825.1	ProteinID:BAS80584.1	ProteinID:EEE57677.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430
GO:GO:0055114	InterPro:IPR036188	EnsemblPlantsGene:Os02g0713400	EnsemblPlants:Os02t0713400-01	PFAM:PF07992	PRINTS:PR00368
PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2
UniProt:Q6ZFU6	SUPFAM:SSF51905	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI00002367E1	RefSeq:XP_015627135.1
SEG:seg	:	:	:	:	:

Description

NADPH-DEPENDENT THIOREDOXIN REDUCTASE BSimilar to Thioredoxin reductase 1 (EC 1.8.1.9) (NADPH-dependent thioredoxin reductase 1) (NTR 1). (Os02t0713400-01)

Coordinates

chr2:+:29550953..29554247

Molecular Weight (calculated)

34678.1 Da

IEP (calculated)

6.626

GRAVY (calculated)

0.011

Length

331 amino acids

Sequence
(BLAST)

001: MEGSAGAPLR TRVCIIGSGP SAHTAAIYAA RAELKPVLFE GWLANDIAAG GQLTTTTDVE NFPGFPEGIL GGELMDRCRA QSLRFGTSII SETVTAVDFS
101: ARPFRVASDS TTVLADAVVV ATGAVARRLH FAGSDAYWNR GISACAVCDG AAPIFRNKPI AVIGGGDSAM EESNFLTKYG SHVYIIHRRN TFRASKIMQA
201: RALSNPKIQV FWDSEVVEAY GGEGGGPLAG VKVKNLVTGK ISDLQVSGLF FAIGHEPATK FLGGQLELDA DGYVATKPGS THTSVKGVFA AGDVQDKKYR
301: QAITAAGSGC MAALDAEHYL QEVGAQEGKA D

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.