Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74655 | Canola | peroxisome, plastid | 53.63 | 55.81 |
| CDY66403 | Canola | cytosol, nucleus, peroxisome, plastid | 73.18 | 43.96 |
| PGSC0003DMT400048037 | Potato | cytosol | 67.04 | 36.59 |
| Solyc03g032000.2.1 | Tomato | cytosol, extracellular | 65.92 | 35.98 |
| CDY13332 | Canola | plastid | 53.63 | 35.16 |
| CDY41653 | Canola | mitochondrion | 69.27 | 33.16 |
| CDY40633 | Canola | mitochondrion | 67.04 | 32.97 |
| CDY24812 | Canola | mitochondrion | 68.16 | 32.71 |
| CDX72537 | Canola | mitochondrion | 64.8 | 32.22 |
| EES07372 | Sorghum | cytosol, mitochondrion | 59.22 | 32.02 |
| Os02t0713400-01 | Rice | extracellular, plasma membrane | 59.22 | 32.02 |
| Solyc02g082250.2.1 | Tomato | mitochondrion | 64.8 | 31.61 |
| PGSC0003DMT400035477 | Potato | mitochondrion | 64.8 | 31.61 |
| HORVU6Hr1G070120.1 | Barley | cytosol, mitochondrion | 58.1 | 31.42 |
| TraesCS6A01G278000.1 | Wheat | cytosol, mitochondrion | 58.1 | 31.33 |
| TraesCS6B01G306300.1 | Wheat | cytosol | 58.1 | 31.33 |
| TraesCS6D01G258600.1 | Wheat | extracellular, golgi, unclear | 58.1 | 31.33 |
| CDY30367 | Canola | mitochondrion | 59.22 | 30.9 |
| CDY07845 | Canola | plastid | 59.22 | 30.81 |
| KRH76499 | Soybean | nucleus | 63.13 | 30.54 |
| Zm00001d017823_P001 | Maize | cytosol | 59.78 | 30.4 |
| KRH28954 | Soybean | nucleus | 63.13 | 30.38 |
| EES09948 | Sorghum | mitochondrion | 55.31 | 29.2 |
| TraesCS7B01G194200.1 | Wheat | golgi | 58.66 | 28.46 |
| Zm00001d053118_P001 | Maize | cytosol | 55.31 | 28.37 |
| EER89710 | Sorghum | mitochondrion | 58.66 | 28.3 |
| TraesCS7A01G225400.2 | Wheat | mitochondrion | 58.66 | 28.3 |
| TraesCS7D01G229100.1 | Wheat | mitochondrion | 58.1 | 28.18 |
| Zm00001d037429_P001 | Maize | mitochondrion | 58.1 | 28.11 |
| CDY70273 | Canola | cytosol, peroxisome | 19.55 | 27.34 |
| KRH07823 | Soybean | mitochondrion | 59.78 | 27.16 |
| HORVU7Hr1G046890.1 | Barley | plastid | 58.66 | 27.06 |
| GSMUA_Achr9P27590_001 | Banana | mitochondrion | 49.72 | 25.14 |
| CDY30366 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 70.39 | 24.37 |
| CDY26807 | Canola | cytosol, mitochondrion | 71.51 | 19.36 |
| CDY22142 | Canola | cytosol | 7.26 | 17.11 |
| CDY72417 | Canola | cytosol | 7.26 | 17.11 |
| CDY58054 | Canola | cytosol | 9.5 | 15.89 |
| CDY26806 | Canola | cytosol, mitochondrion, peroxisome | 10.06 | 14.17 |
| CDY35405 | Canola | plastid | 36.31 | 12.72 |
| CDY22534 | Canola | plastid | 36.31 | 12.72 |
| CDX79923 | Canola | mitochondrion, plastid | 36.31 | 12.17 |
| CDY23835 | Canola | plastid | 36.31 | 11.97 |
| CDX74431 | Canola | cytosol | 9.5 | 11.56 |
| Os04t0524136-00 | Rice | plastid | 10.61 | 9.55 |
| CDY26805 | Canola | vacuole | 4.47 | 5.26 |
Protein Annotations
| MapMan:10.5.2 | Gene3D:3.50.50.60 | GO:A0A078EYS4 | EnsemblPlants:CDY05719 | ProteinID:CDY05719 | ProteinID:CDY05719.1 |
| InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00120751001 | InterPro:IPR036188 | PFAM:PF07992 | PRINTS:PR00368 |
| PRINTS:PR00469 | PANTHER:PTHR42863 | PANTHER:PTHR42863:SF9 | InterPro:Pyridine_nuc-diS_OxRdtase_2 | SUPFAM:SSF51905 | UniParc:UPI0004EE337E |
Description
BnaC07g00840D
Coordinates
chrLK031964:-:215249..215978
Molecular Weight (calculated)
19779.1 Da
IEP (calculated)
10.636
GRAVY (calculated)
0.058
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MRISLLEDGL FFRKQSERFG IEIFTETVTK VDFSSRPFKL FADSRIVLAD AVIISTGAVA KRLSFVGSGE GAGGFWNRGI SARAVCDGAA LIFRNKPLVV
101: IGGGDSAMEK VYIIHRCDTF KASKIMRPRA LSKPKIEVIW NSVVEMRTGK VRQQSSWMGS LTKPGTTKTS VLFYEAVDF
101: IGGGDSAMEK VYIIHRCDTF KASKIMRPRA LSKPKIEVIW NSVVEMRTGK VRQQSSWMGS LTKPGTTKTS VLFYEAVDF
001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
Arabidopsis Description
NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.