Factsheet for TraesCS7B01G194200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G229100.1	Wheat	mitochondrion	98.64	98.64
TraesCS7A01G225400.2	Wheat	mitochondrion	98.1	97.57
HORVU7Hr1G046890.1	Barley	plastid	98.37	93.56
Zm00001d037429_P001	Maize	mitochondrion	88.35	88.11
EER89710	Sorghum	mitochondrion	88.35	87.87
TraesCS6B01G306300.1	Wheat	cytosol	78.59	87.35
CDY26806	Canola	cytosol, mitochondrion, peroxisome	27.1	78.74
PGSC0003DMT400048037	Potato	cytosol	68.83	77.44
Solyc03g032000.2.1	Tomato	cytosol, extracellular	68.56	77.13
GSMUA_Achr9P27590_001	Banana	mitochondrion	73.17	76.27
Bra017711.1-P	Field mustard	cytosol	62.6	74.04
PGSC0003DMT400035477	Potato	mitochondrion	72.09	72.48
Solyc02g082250.2.1	Tomato	mitochondrion	71.82	72.21
VIT_04s0044g01750.t01	Wine grape	mitochondrion	71.54	70.4
AT4G35460.1	Thale cress	mitochondrion, plastid	71.0	69.87
Bra037274.1-P	Field mustard	mitochondrion	63.14	69.76
CDY40633	Canola	mitochondrion	68.56	69.51
KRH76499	Soybean	nucleus	69.65	69.46
CDX72537	Canola	mitochondrion	67.75	69.44
CDY41653	Canola	mitochondrion	69.38	68.45
CDY22142	Canola	cytosol	14.09	68.42
CDY72417	Canola	cytosol	14.09	68.42
CDY24812	Canola	mitochondrion	69.11	68.36
KRH28954	Soybean	nucleus	68.83	68.28
Bra010533.1-P	Field mustard	mitochondrion	64.77	67.9
CDY07845	Canola	plastid	62.87	67.44
CDY30367	Canola	mitochondrion	62.6	67.35
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	54.2	67.11
AT2G17420.1	Thale cress	mitochondrion, plastid	69.38	66.84
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	52.85	66.78
CDX74655	Canola	peroxisome, plastid	30.89	66.28
KRH07823	Soybean	mitochondrion	68.83	64.47
Bra025646.1-P	Field mustard	cytosol	13.28	62.82
VIT_05s0049g00110.t01	Wine grape	cytosol	17.62	61.32
CDY05719	Canola	cytosol	28.46	58.66
CDY58054	Canola	cytosol	16.53	57.01
Bra031685.1-P	Field mustard	cytosol	16.26	56.07
CDX74431	Canola	cytosol	19.78	49.66
CDY26805	Canola	vacuole	20.05	48.68
CDY70273	Canola	cytosol, peroxisome	16.26	46.88
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.77	46.23
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	64.5	46.12
CDY13332	Canola	plastid	31.98	43.22
CDY26807	Canola	cytosol, mitochondrion	66.4	37.07
TraesCS2B01G154700.1	Wheat	plastid	48.51	34.42
Bra025645.1-P	Field mustard	cytosol	17.89	29.6

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430
GO:GO:0055114	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573
PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292
InterPro:Thioredox_Rdtase	EnsemblPlantsGene:TraesCS7B01G194200	EnsemblPlants:TraesCS7B01G194200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:333957975..333963387

Molecular Weight (calculated)

38537.6 Da

IEP (calculated)

6.936

GRAVY (calculated)

0.049

Length

369 amino acids

Sequence
(BLAST)

001: MRLCSKLAAL LRRSRPFAAA TAAASVSATA TAAAAANGME EAAAGPLHTR VCIIGSGPAA HTAAVYAARA ELKPVLFEGW LANDIAAGGQ LTTTTDVENF
101: PGFPDGILGI DLMDRCRAQS VRFGTKIFSE TVTSVDFSSR PFRVTSDDTV VHADSVVVAT GAVARRLHFA GSDAFWNRGI SACAVCDGAA PIFRNKPIAV
201: VGGGDSAMEE ANFLTKYGSR VYIIHRRDAF RASKIMQARA LSNPKIQVVW DSEVVEAYGG SDGGPLGGVK VKNLVTGEVS DFQVAGLFFA IGHEPATKFL
301: AGQLELDSDG YVATKPGSTH TSVKGVFAAG DVQDKKYRQA ITAAGSGCMA ALDAEHYLQE VGAQEGKTD

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.