Factsheet for Bra010533.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24812	Canola	mitochondrion	99.43	93.83
Bra017711.1-P	Field mustard	cytosol	77.84	87.82
AT4G35460.1	Thale cress	mitochondrion, plastid	84.38	79.2
Bra037274.1-P	Field mustard	mitochondrion	70.17	73.95
PGSC0003DMT400048037	Potato	cytosol	67.9	72.87
Solyc03g032000.2.1	Tomato	cytosol, extracellular	67.33	72.26
EES07372	Sorghum	cytosol, mitochondrion	66.48	70.69
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	58.24	70.21
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	65.91	69.88
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	65.91	69.88
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	65.62	69.79
Os02t0713400-01	Rice	extracellular, plasma membrane	65.62	69.79
TraesCS6B01G306300.1	Wheat	cytosol	65.34	69.28
PGSC0003DMT400035477	Potato	mitochondrion	71.88	68.94
Solyc02g082250.2.1	Tomato	mitochondrion	71.59	68.66
KRH76499	Soybean	nucleus	71.59	68.11
Bra025646.1-P	Field mustard	cytosol	15.06	67.95
Zm00001d017823_P001	Maize	cytosol	66.76	66.76
KRH28954	Soybean	nucleus	70.17	66.4
EER89710	Sorghum	mitochondrion	68.47	64.96
TraesCS7B01G194200.1	Wheat	golgi	67.9	64.77
TraesCS7D01G229100.1	Wheat	mitochondrion	67.33	64.23
TraesCS7A01G225400.2	Wheat	mitochondrion	67.61	64.15
Zm00001d037429_P001	Maize	mitochondrion	67.33	64.05
EES09948	Sorghum	mitochondrion	61.65	64.01
GSMUA_Achr9P27590_001	Banana	mitochondrion	62.78	62.43
Zm00001d053118_P001	Maize	cytosol	61.08	61.6
HORVU7Hr1G046890.1	Barley	plastid	67.05	60.82
KRH07823	Soybean	mitochondrion	67.61	60.41
Bra031685.1-P	Field mustard	cytosol	17.61	57.94
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	74.43	50.78
Os04t0524136-00	Rice	plastid	18.47	32.66
Bra000234.1-P	Field mustard	plastid	45.17	31.12
Bra004639.1-P	Field mustard	plastid	45.45	30.71
Bra025645.1-P	Field mustard	cytosol	18.47	29.15

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra010533	EnsemblPlants:Bra010533.1	EnsemblPlants:Bra010533.1-P
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114	InterPro:IPR036188	UniProt:M4D233
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9
InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0002545E31
SEG:seg	:	:	:	:	:

Description

AT4G35460 (E=1e-140) ATNTRB, NTRB, NTR1 | NTRB (NADPH-DEPENDENT THIOREDOXIN REDUCTASE B); thioredoxin-disulfide reductase

Coordinates

chrA08:-:15019902..15021412

Molecular Weight (calculated)

37405.9 Da

IEP (calculated)

9.827

GRAVY (calculated)

-0.013

Length

352 amino acids

Sequence
(BLAST)

001: MNCMHRSRFL IKSLLSRART IARLGSSTLS QPQPPSLSST VMSRLETHNT KLCIVGSGPA AHTAAIYAAR AELKPLLFEG WMANDIAPGG QLTTTTDVEN
101: FPGFPQGILG AELTDKFRKQ SERFGTTIFT ETVTKVDFTS KPFKLFTESR AVLADAVILA TGAVAKRLSF PGSGEGSGGF WNRGISACAV CDGAAPIFRD
201: KPLAVIGGGD SAMEEANFLT KYGSKVYIIH RRDAFRASKI MQQRALANPK INVIWNSTVV EAYGEGEGGV LGGVKVKNVV TGEVLDLKVS GLFFAIGHEP
301: ATKFLDGTVK LDSDGYVVTK LGSTQTSVVG VFAAGDVQDK KYRQAVTAAG TG

Best Arabidopsis Sequence Match ( AT4G35460.1 )
(BLAST)

001: MNCVSRLKCL ISKARSFARL GGESTLSQPP SLASAAFSSS AVMNGLETHN TRLCIVGSGP AAHTAAIYAA RAELKPLLFE GWMANDIAPG GQLTTTTDVE
101: NFPGFPEGIL GVELTDKFRK QSERFGTTIF TETVTKVDFS SKPFKLFTDS KAILADAVIL ATGAVAKRLS FVGSGEASGG FWNRGISACA VCDGAAPIFR
201: NKPLAVIGGG DSAMEEANFL TKYGSKVYII HRRDAFRASK IMQQRALSNP KIDVIWNSSV VEAYGDGERD VLGGLKVKNV VTGDVSDLKV SGLFFAIGHE
301: PATKFLDGGV ELDSDGYVVT KPGTTQTSVP GVFAAGDVQD KKYRQAITAA GTGCMAALDA EHYLQEIGSQ QGKSD

Arabidopsis Description

NTR1Thioredoxin reductase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39243]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.