Factsheet for Bra031685.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58054	Canola	cytosol	99.07	99.07
Bra025646.1-P	Field mustard	cytosol	44.86	61.54
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	64.49	23.63
Bra037274.1-P	Field mustard	mitochondrion	65.42	20.96
Bra017711.1-P	Field mustard	cytosol	57.94	19.87
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	57.94	18.67
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	57.94	18.67
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	57.01	18.43
Os02t0713400-01	Rice	extracellular, plasma membrane	57.01	18.43
TraesCS6B01G306300.1	Wheat	cytosol	57.01	18.37
GSMUA_Achr9P27590_001	Banana	mitochondrion	60.75	18.36
PGSC0003DMT400048037	Potato	cytosol	55.14	17.99
EES07372	Sorghum	cytosol, mitochondrion	55.14	17.82
Solyc03g032000.2.1	Tomato	cytosol, extracellular	54.21	17.68
Bra010533.1-P	Field mustard	mitochondrion	57.94	17.61
KRH76499	Soybean	nucleus	60.75	17.57
KRH28954	Soybean	nucleus	60.75	17.47
PGSC0003DMT400035477	Potato	mitochondrion	59.81	17.44
KRH07823	Soybean	mitochondrion	63.55	17.26
Solyc02g082250.2.1	Tomato	mitochondrion	58.88	17.17
Zm00001d017823_P001	Maize	cytosol	56.07	17.05
EER89710	Sorghum	mitochondrion	58.88	16.98
Zm00001d037429_P001	Maize	mitochondrion	57.94	16.76
EES09948	Sorghum	mitochondrion	52.34	16.52
TraesCS7B01G194200.1	Wheat	golgi	56.07	16.26
TraesCS7A01G225400.2	Wheat	mitochondrion	55.14	15.9
TraesCS7D01G229100.1	Wheat	mitochondrion	54.21	15.72
Zm00001d053118_P001	Maize	cytosol	50.47	15.47
HORVU7Hr1G046890.1	Barley	plastid	54.21	14.95
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.55	13.18
Bra000234.1-P	Field mustard	plastid	41.12	8.61
Bra004639.1-P	Field mustard	plastid	41.12	8.45
Bra025645.1-P	Field mustard	cytosol	5.61	2.69
Os04t0524136-00	Rice	plastid	0.0	0.0
VIT_05s0049g00110.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

MapMan:10.5.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra031685	EnsemblPlants:Bra031685.1	EnsemblPlants:Bra031685.1-P	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR036188	UniProt:M4ESA7	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469
PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI0002543224	SEG:seg

Description

AT2G17420 (E=6e-035) NTRA, ATNTRA, NTR2 | NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A); thioredoxin-disulfide reductase

Coordinates

chrA09:-:35245500..35246963

Molecular Weight (calculated)

11435.7 Da

IEP (calculated)

4.738

GRAVY (calculated)

0.055

Length

107 amino acids

Sequence
(BLAST)

001: MSPLPANLSL LASDLESMVK NVVTGDVSDL KMSGLFFAIG HERATKFLDS QLELDEDGYV VTKPGTTKTS VVGVFSAGDV QDKSYRQALP AAGTGLFSKS
101: LFTFIEK

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.