CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26806	Canola	cytosol, mitochondrion, peroxisome	26.4	81.89
PGSC0003DMT400048037	Potato	cytosol	62.69	75.3
Solyc03g032000.2.1	Tomato	cytosol, extracellular	62.44	75.0
CDY72417	Canola	cytosol	14.47	75.0
CDY22142	Canola	cytosol	14.47	75.0
KRH76499	Soybean	nucleus	70.05	74.59
Os02t0713400-01	Rice	extracellular, plasma membrane	62.44	74.32
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	62.44	74.1
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	62.44	74.1
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	62.18	74.02
TraesCS6B01G306300.1	Wheat	cytosol	62.18	73.8
Bra017711.1-P	Field mustard	cytosol	58.38	73.72
EES07372	Sorghum	cytosol, mitochondrion	61.68	73.41
KRH28954	Soybean	nucleus	69.29	73.39
Bra025646.1-P	Field mustard	cytosol	14.21	71.79
VIT_04s0044g01750.t01	Wine grape	mitochondrion	68.27	71.73
CDX74655	Canola	peroxisome, plastid	30.46	69.77
PGSC0003DMT400035477	Potato	mitochondrion	64.97	69.75
CDX72537	Canola	mitochondrion	63.71	69.72
EES09948	Sorghum	mitochondrion	59.64	69.32
Zm00001d017823_P001	Maize	cytosol	61.93	69.32
Solyc02g082250.2.1	Tomato	mitochondrion	64.47	69.21
Zm00001d037429_P001	Maize	mitochondrion	64.97	69.19
Bra037274.1-P	Field mustard	mitochondrion	58.63	69.16
CDY40633	Canola	mitochondrion	63.71	68.96
TraesCS7B01G194200.1	Wheat	golgi	64.47	68.83
AT4G35460.1	Thale cress	mitochondrion, plastid	65.48	68.8
Zm00001d053118_P001	Maize	cytosol	60.91	68.77
GSMUA_Achr9P27590_001	Banana	mitochondrion	61.68	68.64
AT2G17420.1	Thale cress	mitochondrion, plastid	66.24	68.15
CDY24812	Canola	mitochondrion	64.47	68.1
TraesCS7D01G229100.1	Wheat	mitochondrion	63.71	68.02
EER89710	Sorghum	mitochondrion	63.96	67.92
TraesCS7A01G225400.2	Wheat	mitochondrion	63.96	67.92
CDY41653	Canola	mitochondrion	64.21	67.65
Bra010533.1-P	Field mustard	mitochondrion	60.41	67.61
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	49.49	66.78
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	50.51	66.78
CDY07845	Canola	plastid	58.12	66.57
CDY30367	Canola	mitochondrion	57.36	65.89
HORVU7Hr1G046890.1	Barley	plastid	63.96	64.95
CDY58054	Canola	cytosol	17.51	64.49
Bra031685.1-P	Field mustard	cytosol	17.26	63.55
CDY05719	Canola	cytosol	27.16	59.78
CDX74431	Canola	cytosol	20.56	55.1
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.93	47.2
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	61.68	47.09
CDY13332	Canola	plastid	31.47	45.42
CDY26805	Canola	vacuole	17.26	44.74
CDY70273	Canola	cytosol, peroxisome	14.47	44.53
CDY26807	Canola	cytosol, mitochondrion	62.69	37.37
KRH33290	Soybean	nucleus	45.43	34.49
KRH72015	Soybean	nucleus	45.43	34.29
Os04t0524136-00	Rice	plastid	16.75	33.17
Bra025645.1-P	Field mustard	cytosol	16.24	28.7

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	EntrezGene:100794363	Gene3D:3.50.50.60	EMBL:ACUP02010114	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	EnsemblPlantsGene:GLYMA_16G113100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114	UniProt:I1MMU1	InterPro:IPR036188
EnsemblPlants:KRH07823	ProteinID:KRH07823	ProteinID:KRH07823.1	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469
ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI000233ED6E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:-:25123945..25127004

Molecular Weight (calculated)

41198.9 Da

IEP (calculated)

8.206

GRAVY (calculated)

-0.020

Length

394 amino acids

Sequence
(BLAST)

001: MRIFPNTFFT KARNLIGLGF ASSTAATIAA STSAASSSPS STSSSDAGDT SSSYSSSSEA QIVHRKILKT KLCIIGSGPA AHTAAIYAAR AELKPVLFEG
101: WMANGVAPGG QLTTTTDVEN FPGFPAGILG TDLMDRCRQQ SQRFGAEVVT ETVTAVDLSQ RPFRVYSDST TVEAESVVVA TGAVAKRLNF DGAGDTPDGF
201: WNRGISACAV CDGAAPIFRG KPLVVIGGGD SAMEEATFLS KFGSKVYIIH RRDKFRASKV MQGKVMSNPK IEVLWNSVVV GAHGDDKGRI LGGVKVKNVV
301: TGAVSDLKVS GLFFAIGHEP ATKFLDGQLE LDSDGYIVTK PGTTKTSVDG VFAAGDVQDK KYRQAITAAG TGCMAALDAE HYLQGIGLQE GKSV

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.