Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26805 | Canola | vacuole | 32.03 | 26.97 |
| Os04t0524136-00 | Rice | plastid | 35.16 | 22.61 |
| Bra025645.1-P | Field mustard | cytosol | 36.72 | 21.08 |
| CDY30367 | Canola | mitochondrion | 56.25 | 20.99 |
| CDY07845 | Canola | plastid | 56.25 | 20.93 |
| CDY05719 | Canola | cytosol | 27.34 | 19.55 |
| CDY41653 | Canola | mitochondrion | 54.69 | 18.72 |
| CDY24812 | Canola | mitochondrion | 53.12 | 18.23 |
| CDY40633 | Canola | mitochondrion | 51.56 | 18.13 |
| CDX72537 | Canola | mitochondrion | 50.78 | 18.06 |
| TraesCS6B01G306300.1 | Wheat | cytosol | 44.53 | 17.17 |
| TraesCS6D01G258600.1 | Wheat | extracellular, golgi, unclear | 44.53 | 17.17 |
| TraesCS6A01G278000.1 | Wheat | cytosol, mitochondrion | 44.53 | 17.17 |
| EES07372 | Sorghum | cytosol, mitochondrion | 43.75 | 16.92 |
| HORVU6Hr1G070120.1 | Barley | cytosol, mitochondrion | 43.75 | 16.92 |
| KRH76499 | Soybean | nucleus | 48.44 | 16.76 |
| Os02t0713400-01 | Rice | extracellular, plasma membrane | 42.97 | 16.62 |
| KRH28954 | Soybean | nucleus | 47.66 | 16.4 |
| TraesCS7B01G194200.1 | Wheat | golgi | 46.88 | 16.26 |
| TraesCS7A01G225400.2 | Wheat | mitochondrion | 46.88 | 16.17 |
| PGSC0003DMT400048037 | Potato | cytosol | 41.41 | 16.16 |
| Solyc03g032000.2.1 | Tomato | cytosol, extracellular | 41.41 | 16.16 |
| GSMUA_Achr9P27590_001 | Banana | mitochondrion | 44.53 | 16.1 |
| Solyc02g082250.2.1 | Tomato | mitochondrion | 46.09 | 16.08 |
| PGSC0003DMT400035477 | Potato | mitochondrion | 46.09 | 16.08 |
| TraesCS7D01G229100.1 | Wheat | mitochondrion | 46.09 | 15.99 |
| Zm00001d017823_P001 | Maize | cytosol | 42.97 | 15.62 |
| HORVU7Hr1G046890.1 | Barley | plastid | 46.88 | 15.46 |
| Zm00001d037429_P001 | Maize | mitochondrion | 44.53 | 15.41 |
| EES09948 | Sorghum | mitochondrion | 39.84 | 15.04 |
| EER89710 | Sorghum | mitochondrion | 42.97 | 14.82 |
| Zm00001d053118_P001 | Maize | cytosol | 39.84 | 14.61 |
| KRH07823 | Soybean | mitochondrion | 44.53 | 14.47 |
| CDY30366 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 49.22 | 12.19 |
| CDY66403 | Canola | cytosol, nucleus, peroxisome, plastid | 25.78 | 11.07 |
| CDY26807 | Canola | cytosol, mitochondrion | 50.0 | 9.68 |
| CDY35405 | Canola | plastid | 33.59 | 8.41 |
| CDY22534 | Canola | plastid | 33.59 | 8.41 |
| CDY23835 | Canola | plastid | 33.59 | 7.92 |
| CDX79923 | Canola | mitochondrion, plastid | 32.81 | 7.87 |
| CDY13332 | Canola | plastid | 7.81 | 3.66 |
| CDY72417 | Canola | cytosol | 0.78 | 1.32 |
| CDY22142 | Canola | cytosol | 0.78 | 1.32 |
| CDX74655 | Canola | peroxisome, plastid | 1.56 | 1.16 |
| CDY58054 | Canola | cytosol | 0.78 | 0.93 |
| CDY26806 | Canola | cytosol, mitochondrion, peroxisome | 0.78 | 0.79 |
| CDX74431 | Canola | cytosol | 0.78 | 0.68 |
Protein Annotations
| EnsemblPlants:CDY70273 | EnsemblPlantsGene:GSBRNA2T00097664001 | Gene3D:3.50.50.60 | GO:A0A078JRV0 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 |
| InterPro:Pyridine_nuc-diS_OxRdtase_2 | PANTHER:PTHR42863 | PANTHER:PTHR42863:SF9 | PRINTS:PR00469 | ProteinID:CDY70273 | ProteinID:CDY70273.1 |
| SUPFAM:SSF51905 | UniParc:UPI0004EE031D | UniProt:A0A078JRV0 | MapMan:10.5.2 | : | : |
Description
BnaUnng03740DBnaUnng03740D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JRV0]
Coordinates
chrLK041649:-:1932..2400
Molecular Weight (calculated)
14280.9 Da
IEP (calculated)
5.217
GRAVY (calculated)
-0.345
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: IPARKVTSYL CATCPEHETY RTINSGVGLD CELKPRFEWM ANDIVPGGQL TTTTDVENLH GFPEGILGID IIDKFRKQSE RFGTEIFTEK VTKVDFSSRL
101: FKLFTDSRTV LADAPTPSSS PPELLRNG
101: FKLFTDSRTV LADAPTPSSS PPELLRNG
001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT G
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT G
Arabidopsis Description
NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.