CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40633	Canola	mitochondrion	96.67	95.6
CDY26806	Canola	cytosol, mitochondrion, peroxisome	29.72	84.25
CDY41653	Canola	mitochondrion	85.83	82.62
CDY24812	Canola	mitochondrion	85.28	82.31
AT4G35460.1	Thale cress	mitochondrion, plastid	82.78	79.47
PGSC0003DMT400048037	Potato	cytosol	69.72	76.52
Solyc03g032000.2.1	Tomato	cytosol, extracellular	69.17	75.91
CDY30367	Canola	mitochondrion	70.56	74.05
CDY07845	Canola	plastid	70.56	73.84
EES07372	Sorghum	cytosol, mitochondrion	67.78	73.72
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	67.22	72.89
TraesCS6B01G306300.1	Wheat	cytosol	67.22	72.89
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	67.22	72.89
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	66.94	72.81
KRH76499	Soybean	nucleus	74.17	72.16
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	59.72	72.15
Os02t0713400-01	Rice	extracellular, plasma membrane	66.11	71.9
PGSC0003DMT400035477	Potato	mitochondrion	72.78	71.39
Solyc02g082250.2.1	Tomato	mitochondrion	72.5	71.12
KRH28954	Soybean	nucleus	73.33	70.97
Zm00001d017823_P001	Maize	cytosol	67.78	69.32
CDX74655	Canola	peroxisome, plastid	33.06	69.19
CDY72417	Canola	cytosol	14.44	68.42
CDY22142	Canola	cytosol	14.44	68.42
TraesCS7B01G194200.1	Wheat	golgi	69.44	67.75
Zm00001d037429_P001	Maize	mitochondrion	69.17	67.3
EES09948	Sorghum	mitochondrion	63.06	66.96
TraesCS7D01G229100.1	Wheat	mitochondrion	68.61	66.94
EER89710	Sorghum	mitochondrion	68.89	66.85
TraesCS7A01G225400.2	Wheat	mitochondrion	68.89	66.85
CDY05719	Canola	cytosol	32.22	64.8
Zm00001d053118_P001	Maize	cytosol	62.5	64.47
GSMUA_Achr9P27590_001	Banana	mitochondrion	63.33	64.41
HORVU7Hr1G046890.1	Barley	plastid	68.89	63.92
KRH07823	Soybean	mitochondrion	69.72	63.71
CDY58054	Canola	cytosol	17.22	57.94
CDY26805	Canola	vacuole	22.22	52.63
CDX74431	Canola	cytosol	21.39	52.38
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	74.44	51.84
CDY70273	Canola	cytosol, peroxisome	18.06	50.78
CDY13332	Canola	plastid	34.72	45.79
CDY26807	Canola	cytosol, mitochondrion	75.0	40.85
CDY22534	Canola	plastid	46.94	33.07
CDY35405	Canola	plastid	46.67	32.88
CDX79923	Canola	mitochondrion, plastid	47.5	32.02
CDY23835	Canola	plastid	47.5	31.49
Os04t0524136-00	Rice	plastid	16.94	30.65

Protein Annotations

KEGG:00240+1.8.1.9	KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	GO:A0A078C6S8	EnsemblPlants:CDX72537
ProteinID:CDX72537	ProteinID:CDX72537.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00100074001	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573
PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292
InterPro:Thioredox_Rdtase	UniParc:UPI0004EE06ED	SEG:seg	:	:	:

Description

BnaC07g45590D

Coordinates

chrLK031796:+:1759621..1761359

Molecular Weight (calculated)

37886.1 Da

IEP (calculated)

7.021

GRAVY (calculated)

0.006

Length

360 amino acids

Sequence
(BLAST)

001: MSCLNRSRLL IKSLISRPPS LASAFSSSAA MNGLETHKTK LCIVGSGPAA HTAAIYAARA ELNPLLFEGW MANDIAPGGQ LTTTTDVENF PGFPDGILGS
101: DLTDNFRRQS ERFGAKIFTE TVTKVDFSSK PLKLFTDSRA VIADAVILAT GAVAKRLAFP GSGDGTGGFW NRGISACAVC DGAAPIFRGK PLAVIGGGDS
201: AMEEASFLTK YGSKVSIIHR RDAFRASKIM QQRVFANPKI DVVWNSTVLE AYGDGVLGGL KVKNVVTGDV EDLRVSGLFF AIGHEPATRF LDGAVELDSD
301: GYVVTKAGST ETSVAGVFAA GDVQDKKYRQ AVTAAGTGCM AALDAEHYLQ EIGSQQGKSD

Best Arabidopsis Sequence Match ( AT4G35460.1 )
(BLAST)

001: MNCVSRLKCL ISKARSFARL GGESTLSQPP SLASAAFSSS AVMNGLETHN TRLCIVGSGP AAHTAAIYAA RAELKPLLFE GWMANDIAPG GQLTTTTDVE
101: NFPGFPEGIL GVELTDKFRK QSERFGTTIF TETVTKVDFS SKPFKLFTDS KAILADAVIL ATGAVAKRLS FVGSGEASGG FWNRGISACA VCDGAAPIFR
201: NKPLAVIGGG DSAMEEANFL TKYGSKVYII HRRDAFRASK IMQQRALSNP KIDVIWNSSV VEAYGDGERD VLGGLKVKNV VTGDVSDLKV SGLFFAIGHE
301: PATKFLDGGV ELDSDGYVVT KPGTTQTSVP GVFAAGDVQD KKYRQAITAA GTGCMAALDA EHYLQEIGSQ QGKSD

Arabidopsis Description

NTR1Thioredoxin reductase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39243]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.