Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0049g00110.t01 | Wine grape | cytosol | 21.61 | 40.57 |
| CDY70273 | Canola | cytosol, peroxisome | 22.61 | 35.16 |
| CDY26805 | Canola | vacuole | 24.62 | 32.24 |
| Os02t0713400-01 | Rice | extracellular, plasma membrane | 36.18 | 21.75 |
| Solyc03g032000.2.1 | Tomato | cytosol, extracellular | 32.66 | 19.82 |
| PGSC0003DMT400048037 | Potato | cytosol | 32.66 | 19.82 |
| Bra017711.1-P | Field mustard | cytosol | 30.65 | 19.55 |
| PGSC0003DMT400035477 | Potato | mitochondrion | 34.67 | 18.8 |
| KRH76499 | Soybean | nucleus | 34.67 | 18.65 |
| KRH28954 | Soybean | nucleus | 34.67 | 18.55 |
| Solyc02g082250.2.1 | Tomato | mitochondrion | 34.17 | 18.53 |
| Bra010533.1-P | Field mustard | mitochondrion | 32.66 | 18.47 |
| GSMUA_Achr9P27590_001 | Banana | mitochondrion | 32.66 | 18.36 |
| Bra037274.1-P | Field mustard | mitochondrion | 30.65 | 18.26 |
| CDY30367 | Canola | mitochondrion | 30.65 | 17.78 |
| CDY07845 | Canola | plastid | 30.65 | 17.73 |
| CDY24812 | Canola | mitochondrion | 32.66 | 17.43 |
| CDY41653 | Canola | mitochondrion | 32.66 | 17.38 |
| AT4G35460.1 | Thale cress | mitochondrion, plastid | 32.66 | 17.33 |
| VIT_04s0044g01750.t01 | Wine grape | mitochondrion | 32.16 | 17.07 |
| CDY40633 | Canola | mitochondrion | 31.16 | 17.03 |
| CDX72537 | Canola | mitochondrion | 30.65 | 16.94 |
| KRH07823 | Soybean | mitochondrion | 33.17 | 16.75 |
| AT2G17420.1 | Thale cress | mitochondrion, plastid | 30.65 | 15.93 |
| Bra025645.1-P | Field mustard | cytosol | 13.57 | 12.11 |
| CDY30366 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 29.65 | 11.41 |
| Bra037273.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 29.15 | 11.24 |
| CDY05719 | Canola | cytosol | 9.55 | 10.61 |
| Os07t0657900-02 | Rice | plastid | 25.63 | 9.9 |
| CDY26807 | Canola | cytosol, mitochondrion | 30.15 | 9.08 |
| CDY66403 | Canola | cytosol, nucleus, peroxisome, plastid | 12.06 | 8.05 |
| Bra024516.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 10.05 | 6.85 |
| CDY13332 | Canola | plastid | 3.52 | 2.56 |
| CDX74655 | Canola | peroxisome, plastid | 1.51 | 1.74 |
| Bra025646.1-P | Field mustard | cytosol | 0.5 | 1.28 |
| CDX74431 | Canola | cytosol | 0.5 | 0.68 |
| CDY26806 | Canola | cytosol, mitochondrion, peroxisome | 0.0 | 0.0 |
| Bra031685.1-P | Field mustard | cytosol | 0.0 | 0.0 |
| CDY22142 | Canola | cytosol | 0.0 | 0.0 |
| CDY72417 | Canola | cytosol | 0.0 | 0.0 |
| CDY58054 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0524136-00 | EnsemblPlantsGene:Os04g0524136 | Gene3D:3.50.50.60 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 | InterPro:Pyridine_nuc-diS_OxRdtase_2 |
| PANTHER:PTHR42863 | PANTHER:PTHR42863:SF9 | PRINTS:PR00469 | ProteinID:BAS90147.1 | SEG:seg | UniParc:UPI000393B978 |
| UniProt:A0A0P0WCK3 | MapMan:10.5.2 | : | : | : | : |
Description
Similar to Thioredoxin reductase. (Os04t0524136-00)
Coordinates
chr4:+:26218133..26218839
Molecular Weight (calculated)
21419.5 Da
IEP (calculated)
9.690
GRAVY (calculated)
-0.062
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSNVAADT AWDPRRPHMS TSFPPPLSTS LPLSSPLHGR RQRSSWARAT GAGGWDWERS RQFVPAATAA SWLATVAAAS ANGIIGTRVC VIGSGPTVCI
101: IRTRPTVHTS VVYVACAELK PVLFEGFFGN DIATGRQLTT TSTDVENFPG FPNGILDADL MDRCRAQPVH FGTRIVSETV TAVDPSSCPF RVANLPRRR
101: IRTRPTVHTS VVYVACAELK PVLFEGFFGN DIATGRQLTT TSTDVENFPG FPNGILDADL MDRCRAQPVH FGTRIVSETV TAVDPSSCPF RVANLPRRR
001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
Arabidopsis Description
NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.