CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26806	Canola	cytosol, mitochondrion, peroxisome	17.4	90.55
CDX74655	Canola	peroxisome, plastid	21.48	82.56
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.24	80.85
CDY30367	Canola	mitochondrion	41.15	79.3
CDY07845	Canola	plastid	41.0	78.78
PGSC0003DMT400048037	Potato	cytosol	38.73	78.05
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	35.1	77.85
Solyc03g032000.2.1	Tomato	cytosol, extracellular	38.58	77.74
CDY72417	Canola	cytosol	8.93	77.63
CDY22142	Canola	cytosol	8.93	77.63
CDX72537	Canola	mitochondrion	40.85	75.0
CDY41653	Canola	mitochondrion	42.36	74.87
CDY40633	Canola	mitochondrion	41.15	74.73
CDY24812	Canola	mitochondrion	41.91	74.26
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	36.91	73.49
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	36.91	73.49
TraesCS6B01G306300.1	Wheat	cytosol	36.76	73.19
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	36.61	73.11
Os02t0713400-01	Rice	extracellular, plasma membrane	36.46	72.81
EES07372	Sorghum	cytosol, mitochondrion	36.31	72.51
PGSC0003DMT400035477	Potato	mitochondrion	39.94	71.93
Solyc02g082250.2.1	Tomato	mitochondrion	39.79	71.66
CDY05719	Canola	cytosol	19.36	71.51
KRH76499	Soybean	nucleus	39.94	71.35
KRH28954	Soybean	nucleus	39.79	70.7
Zm00001d017823_P001	Maize	cytosol	36.31	68.18
EES09948	Sorghum	mitochondrion	34.34	66.96
TraesCS7B01G194200.1	Wheat	golgi	37.07	66.4
CDY58054	Canola	cytosol	10.74	66.36
Zm00001d037429_P001	Maize	mitochondrion	36.91	65.95
TraesCS7D01G229100.1	Wheat	mitochondrion	36.76	65.85
EER89710	Sorghum	mitochondrion	36.91	65.77
TraesCS7A01G225400.2	Wheat	mitochondrion	36.91	65.77
Zm00001d053118_P001	Maize	cytosol	34.04	64.47
GSMUA_Achr9P27590_001	Banana	mitochondrion	33.74	62.99
KRH07823	Soybean	mitochondrion	37.37	62.69
HORVU7Hr1G046890.1	Barley	plastid	36.61	62.37
CDX74431	Canola	cytosol	13.46	60.54
CDY13332	Canola	plastid	21.63	52.38
CDY70273	Canola	cytosol, peroxisome	9.68	50.0
CDY26805	Canola	vacuole	11.35	49.34
CDY35405	Canola	plastid	28.14	36.4
CDY22534	Canola	plastid	28.14	36.4
CDX79923	Canola	mitochondrion, plastid	28.14	34.83
CDY23835	Canola	plastid	28.14	34.25
Os04t0524136-00	Rice	plastid	9.08	30.15

Protein Annotations

KEGG:00240+1.8.1.9	KEGG:00450+1.8.1.9	Gene3D:1.10.10.60	MapMan:10.5.2	Gene3D:3.50.50.60	GO:A0A078GNP3
UniProt:A0A078GNP3	EnsemblPlants:CDY26807	ProteinID:CDY26807	ProteinID:CDY26807.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0019430	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00035751001	InterPro:IPR017877	InterPro:IPR036188	InterPro:Myb-like_dom
InterPro:NAM-associated_C	PFAM:PF07992	PFAM:PF14303	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573
PFscan:PS50090	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0004EE882C	SEG:seg	:	:

Description

BnaC09g09340DThioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:A0A078GNP3]

Coordinates

chrLK032194:+:349273..354571

Molecular Weight (calculated)

72719.1 Da

IEP (calculated)

9.088

GRAVY (calculated)

-0.403

Length

661 amino acids

Sequence
(BLAST)

001: MTLEREEWVR VKVRLSTRIC SLHAVMETHK TKVCIVGSGP AAHTAAIYAA RAELTPLLFE GWMANDIAPG GQLTTTTDVE NFPGFPDGIL GVDLVAKFRK
101: QSERFGTKIF TETVNKVDFS SKPFKLFTNT RTVLADSVIV STGAVAKRLS FPGSGEGAGG FWNRGISACA VCDGAAPIFR DKPLVVIGGG DSAMEEANFL
201: TKYGSKVYII HRRDTFRASK IMQKRALSNP KIEVILNGSV VEAYGDENGK GVLGGLKVKN VVTGDVSDLK ASGLFFAIGH EPATKFLDGQ LELDEDGYVV
301: TKPGTTKTSV AGVFAAGDVQ DKKYRQAITA AGTGCMAALD AEHYLQEIGS QKVELGQVVR ATPLTVYNGA STTSRSTPFT VYNGVSTSTP FTVDNGETTG
401: RRETRCKWSP AEDVVLINAW LNTDKYIIVA TDQRASSFWK RIAAYYSSSP AAASLPKRES SHCKQRWQKI NDSVCKFVEC YDHALRQRTS GQSEDDVVQV
501: SYQFYFDDCK KRFTLEHAWR KLRHSQKWYS YISKCSKSSG SSKRAKLDEG GTFSSSSNTK SNVDEHAMAR PIGVKSSKGE GEIVVTKTTN EENVVTTKTT
601: NEERESNSRS RLENLWALNE KDIAERNKLS RIELLRSLLG KTEKLSEKEE TLKNKLIDEM L

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.