CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	92.45	92.45
Zm00001d017823_P001	Maize	cytosol	97.28	91.48
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	91.24	90.96
TraesCS6B01G306300.1	Wheat	cytosol	91.24	90.96
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	91.24	90.96
Os02t0713400-01	Rice	extracellular, plasma membrane	90.94	90.94
EES09948	Sorghum	mitochondrion	82.18	80.24
EER89710	Sorghum	mitochondrion	89.12	79.51
CDY26806	Canola	cytosol, mitochondrion, peroxisome	30.21	78.74
PGSC0003DMT400048037	Potato	cytosol	77.34	78.05
Solyc03g032000.2.1	Tomato	cytosol, extracellular	76.74	77.44
Bra017711.1-P	Field mustard	cytosol	69.49	73.72
GSMUA_Achr9P27590_001	Banana	mitochondrion	78.25	73.16
PGSC0003DMT400035477	Potato	mitochondrion	79.46	71.66
Solyc02g082250.2.1	Tomato	mitochondrion	78.85	71.12
CDY22142	Canola	cytosol	15.71	68.42
CDY72417	Canola	cytosol	15.71	68.42
CDY40633	Canola	mitochondrion	75.23	68.41
KRH76499	Soybean	nucleus	76.44	68.38
VIT_04s0044g01750.t01	Wine grape	mitochondrion	77.34	68.27
CDX72537	Canola	mitochondrion	73.72	67.78
CDY41653	Canola	mitochondrion	76.44	67.65
CDY24812	Canola	mitochondrion	76.13	67.56
KRH28954	Soybean	nucleus	75.53	67.2
AT4G35460.1	Thale cress	mitochondrion, plastid	76.13	67.2
Bra037274.1-P	Field mustard	mitochondrion	67.37	66.77
Bra010533.1-P	Field mustard	mitochondrion	70.69	66.48
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	59.52	66.11
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	58.01	65.75
AT2G17420.1	Thale cress	mitochondrion, plastid	75.83	65.54
VIT_05s0049g00110.t01	Wine grape	cytosol	20.85	65.09
CDY30367	Canola	mitochondrion	66.47	64.14
CDY07845	Canola	plastid	66.47	63.95
CDX74655	Canola	peroxisome, plastid	33.23	63.95
KRH07823	Soybean	mitochondrion	73.41	61.68
Bra025646.1-P	Field mustard	cytosol	14.2	60.26
CDY05719	Canola	cytosol	32.02	59.22
CDY58054	Canola	cytosol	18.13	56.07
Bra031685.1-P	Field mustard	cytosol	17.82	55.14
CDX74431	Canola	cytosol	21.45	48.3
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	71.3	45.65
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.0	45.54
CDY70273	Canola	cytosol, peroxisome	16.92	43.75
CDY26805	Canola	vacuole	19.64	42.76
CDY13332	Canola	plastid	34.74	42.12
CDY26807	Canola	cytosol, mitochondrion	72.51	36.31
KXG36845	Sorghum	plastid	51.06	32.25
Bra025645.1-P	Field mustard	cytosol	19.34	28.7

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EntrezGene:8073833	UniProt:C5XZX5	EnsemblPlants:EES07372
ProteinID:EES07372	ProteinID:EES07372.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863
PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	EnsemblPlantsGene:SORBI_3004G262300	SUPFAM:SSF51905	unigene:Sbi.3560
TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0001A85BD3	RefSeq:XP_002454396.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:60738538..60743480

Molecular Weight (calculated)

34744.2 Da

IEP (calculated)

6.165

GRAVY (calculated)

-0.004

Length

331 amino acids

Sequence
(BLAST)

001: MEGSAAAPLR TRVCIIGSGP AAHTAAIYAA RAELKPVLFE GWMANDIAAG GQLTTTTDVE NFPGFPNGIM GADLMDNCRA QSLRFGTNIL SETVTAVDFS
101: ARPFRVTADS TTVLADAVIV ATGAVARRLH FPGSDAYWNR GISACAVCDG AAPIFRNKPI AVVGGGDSAM EEANFLTKYG SHVYIIHRRN TFRASKIMQA
201: RALENPKIKV VWDSEVVEAY GGADGGPLAG VKVKNLLNGE VSDLQVAGLF FAIGHEPATK FLGGQLELDS DGYVATKPGS THTSVKGVFA AGDVQDKKYR
301: QAITAAGSGC MAALDAEHYL QEIGAQEGKS D

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.