Factsheet for Bra037273.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 3
plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	94.96	94.78
Bra017711.1-P	Field mustard	cytosol	49.81	82.37
Bra037274.1-P	Field mustard	mitochondrion	51.36	79.34
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	44.19	78.08
PGSC0003DMT400048037	Potato	cytosol	48.64	76.52
Solyc03g032000.2.1	Tomato	cytosol, extracellular	48.26	75.91
Bra025646.1-P	Field mustard	cytosol	11.43	75.64
Bra010533.1-P	Field mustard	mitochondrion	50.78	74.43
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	45.93	71.39
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	45.93	71.39
TraesCS6B01G306300.1	Wheat	cytosol	45.74	71.08
EES07372	Sorghum	cytosol, mitochondrion	45.54	71.0
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	45.54	71.0
Os02t0713400-01	Rice	extracellular, plasma membrane	45.35	70.69
PGSC0003DMT400035477	Potato	mitochondrion	50.0	70.3
Solyc02g082250.2.1	Tomato	mitochondrion	49.81	70.03
KRH76499	Soybean	nucleus	49.42	68.92
KRH28954	Soybean	nucleus	49.22	68.28
Zm00001d017823_P001	Maize	cytosol	45.54	66.76
EES09948	Sorghum	mitochondrion	42.83	65.19
TraesCS7B01G194200.1	Wheat	golgi	46.12	64.5
TraesCS7D01G229100.1	Wheat	mitochondrion	45.74	63.96
TraesCS7A01G225400.2	Wheat	mitochondrion	45.93	63.88
Bra031685.1-P	Field mustard	cytosol	13.18	63.55
Zm00001d037429_P001	Maize	mitochondrion	45.54	63.51
EER89710	Sorghum	mitochondrion	45.54	63.34
Zm00001d053118_P001	Maize	cytosol	42.05	62.18
KRH07823	Soybean	mitochondrion	47.09	61.68
GSMUA_Achr9P27590_001	Banana	mitochondrion	41.86	61.02
HORVU7Hr1G046890.1	Barley	plastid	45.74	60.82
Bra000234.1-P	Field mustard	plastid	35.08	35.42
Bra004639.1-P	Field mustard	plastid	35.08	34.74
Bra025645.1-P	Field mustard	cytosol	12.98	30.04
Os04t0524136-00	Rice	plastid	11.24	29.15

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra037273	EnsemblPlants:Bra037273.1	EnsemblPlants:Bra037273.1-P
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114	InterPro:IPR036188	UniProt:M4F862
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9
InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0002541DFA
SEG:seg	:	:	:	:	:

Description

AT2G17420 (E=9e-154) NTRA, ATNTRA, NTR2 | NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A); thioredoxin-disulfide reductase

Coordinates

chrA09:+:4613038..4615765

Molecular Weight (calculated)

55324.4 Da

IEP (calculated)

7.883

GRAVY (calculated)

-0.302

Length

516 amino acids

Sequence
(BLAST)

001: METHKAKVCI VGSGPAAHTA AIYAARAELT PILFEGWMAN DIAPGGQLTT TTDVENFPGF PDGILGIDLV AKFRKQSERF GAKIFTETVN KVDFSSKPFK
101: LFTNTRTVLA EAVIVSTGAV AKRLSFPGSG EGAGGFWNRG ISACAVCDGA APIFRDKPLV VIGGGDSAME EANFLTRYGS KVYIIHRRDK FRASKIMQKR
201: ALSNPKIEVI LNGSVVEAYG DESGKGVLGG LKVKNVVNGA VSDLKASGLF FAIGHEPATK FLDGQVELDE DGYVVTKPGT TKTSVAGVFA AGDVQDKKYR
301: QAVTAAGTGC MAALDAEHYL QEIGSQEVEL GQVVRATPLT VYNEVSRSTP VTVYNEVSTS TPLTVYNGAS TSTPFTVNNG ESTVRSYISK CSKSNGSSKR
401: AKLDEGGTFS SSSNTKSNVE EQAMAHPIGV KSSKGEGENL VTKATNEENV ATKTTNDERE SNSRSRLENL WALNERDIAE RNKLSRIELL RSLLGKTEKL
501: SEKEETLKNK LIDEML

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.