Factsheet for GSMUA_Achr9P27590_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26806	Canola	cytosol, mitochondrion, peroxisome	29.38	81.89
Os02t0713400-01	Rice	extracellular, plasma membrane	73.73	78.85
EES07372	Sorghum	cytosol, mitochondrion	73.16	78.25
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	72.88	77.71
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	72.6	77.41
TraesCS6B01G306300.1	Wheat	cytosol	72.32	77.11
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	72.03	77.04
EER89710	Sorghum	mitochondrion	77.68	74.12
Zm00001d037429_P001	Maize	mitochondrion	77.4	74.05
Zm00001d017823_P001	Maize	cytosol	72.88	73.3
TraesCS7D01G229100.1	Wheat	mitochondrion	76.27	73.17
TraesCS7B01G194200.1	Wheat	golgi	76.27	73.17
TraesCS7A01G225400.2	Wheat	mitochondrion	76.55	73.05
CDY72417	Canola	cytosol	15.54	72.37
CDY22142	Canola	cytosol	15.54	72.37
PGSC0003DMT400048037	Potato	cytosol	66.67	71.95
Solyc03g032000.2.1	Tomato	cytosol, extracellular	66.1	71.34
EES09948	Sorghum	mitochondrion	67.23	70.21
PGSC0003DMT400035477	Potato	mitochondrion	72.32	69.75
HORVU7Hr1G046890.1	Barley	plastid	75.99	69.33
Solyc02g082250.2.1	Tomato	mitochondrion	71.47	68.94
Zm00001d053118_P001	Maize	cytosol	67.8	68.77
Bra037274.1-P	Field mustard	mitochondrion	64.69	68.56
Bra025646.1-P	Field mustard	cytosol	14.97	67.95
Bra017711.1-P	Field mustard	cytosol	59.32	67.31
VIT_04s0044g01750.t01	Wine grape	mitochondrion	70.34	66.4
KRH76499	Soybean	nucleus	69.21	66.22
CDY30367	Canola	mitochondrion	64.12	66.18
AT4G35460.1	Thale cress	mitochondrion, plastid	70.06	66.13
CDY07845	Canola	plastid	63.84	65.7
KRH28954	Soybean	nucleus	68.08	64.78
CDY41653	Canola	mitochondrion	67.8	64.17
CDY24812	Canola	mitochondrion	67.23	63.81
CDY40633	Canola	mitochondrion	65.54	63.74
CDX72537	Canola	mitochondrion	64.41	63.33
Bra010533.1-P	Field mustard	mitochondrion	62.43	62.78
AT2G17420.1	Thale cress	mitochondrion, plastid	67.8	62.66
CDY58054	Canola	cytosol	18.64	61.68
KRH07823	Soybean	mitochondrion	68.64	61.68
Bra031685.1-P	Field mustard	cytosol	18.36	60.75
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	50.0	59.4
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	48.87	59.25
VIT_05s0049g00110.t01	Wine grape	cytosol	17.51	58.49
CDX74655	Canola	peroxisome, plastid	27.97	57.56
CDX74431	Canola	cytosol	21.75	52.38
CDY05719	Canola	cytosol	25.14	49.72
CDY26805	Canola	vacuole	20.9	48.68
GSMUA_Achr8P09570_001	Banana	cytosol	22.03	44.57
CDY70273	Canola	cytosol, peroxisome	16.1	44.53
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	61.02	41.86
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.02	41.78
CDY13332	Canola	plastid	28.81	37.36
CDY26807	Canola	cytosol, mitochondrion	62.99	33.74
Os04t0524136-00	Rice	plastid	18.36	32.66
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	46.61	29.15
Bra025645.1-P	Field mustard	cytosol	16.95	26.91
GSMUA_Achr8P09560_001	Banana	cytosol	16.38	25.11

Protein Annotations

MapMan:10.5.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G27590_001	EnsemblPlants:GSMUA_Achr9P27590_001
EnsemblPlants:GSMUA_Achr9T27590_001	InterPro:IPR036188	UniProt:M0U416	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469
ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
UniParc:UPI000295D288	SEG:seg	:	:	:	:

Description

Thioredoxin reductase NTRB [Source:GMGC_GENE;Acc:GSMUA_Achr9G27590_001]

Coordinates

chr9:+:31829507..31833939

Molecular Weight (calculated)

37016.0 Da

IEP (calculated)

5.418

GRAVY (calculated)

0.106

Length

354 amino acids

Sequence
(BLAST)

001: MNLRSKLSAL LKNACSFVGG AVASDSSAAA AAPSPHPVKP FSTATAMADA PTKTLRTRLC IIGSGPAAHT AAIYAARAEL KPILFEGWMA NDIAAGGQLT
101: TTTDVENFPG FPEGIMGYEL MDRCRAQSLR FGTEILSETV TTVDLAVRPF RVISSSTSVE ADAVVVATGA VARRLHFTGA DVFWNRGISA CAVCDGAAPI
201: FRNRPIAVVG GGDSAMEEAN FLTKYGSRVY IIEVLWNSEV VEAFGEADGP LAGVKVRNVV TGEVSDLKVS GLFFAIGHEP ATKFLGGQLE LDSDGYVVTK
301: PGTTHTSVKG VFAAGDVQDK KYRQAITAAG SGCMAALDAE HYLQEVGAQE GKTD

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.