Factsheet for Zm00001d053118_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09948	Sorghum	mitochondrion	87.11	89.68
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	75.64	79.52
TraesCS6B01G306300.1	Wheat	cytosol	75.64	79.52
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	75.36	79.22
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	73.93	77.95
Os02t0713400-01	Rice	extracellular, plasma membrane	73.64	77.64
Zm00001d017823_P001	Maize	cytosol	75.36	74.72
PGSC0003DMT400048037	Potato	cytosol	68.19	72.56
Solyc03g032000.2.1	Tomato	cytosol, extracellular	67.62	71.95
Zm00001d037429_P001	Maize	mitochondrion	75.36	71.08
CDY26806	Canola	cytosol, mitochondrion, peroxisome	25.5	70.08
GSMUA_Achr9P27590_001	Banana	mitochondrion	68.77	67.8
Bra017711.1-P	Field mustard	cytosol	60.46	67.63
PGSC0003DMT400035477	Potato	mitochondrion	69.91	66.48
Solyc02g082250.2.1	Tomato	mitochondrion	69.63	66.21
VIT_04s0044g01750.t01	Wine grape	mitochondrion	69.34	64.53
KRH76499	Soybean	nucleus	67.91	64.05
KRH28954	Soybean	nucleus	67.34	63.17
CDY22142	Canola	cytosol	13.75	63.16
CDY72417	Canola	cytosol	13.75	63.16
CDY40633	Canola	mitochondrion	65.33	62.64
CDX72537	Canola	mitochondrion	64.47	62.5
CDY41653	Canola	mitochondrion	66.19	61.76
CDY24812	Canola	mitochondrion	65.9	61.66
AT4G35460.1	Thale cress	mitochondrion, plastid	66.19	61.6
Bra010533.1-P	Field mustard	mitochondrion	61.6	61.08
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	52.15	61.07
KRH07823	Soybean	mitochondrion	68.77	60.91
Bra037274.1-P	Field mustard	mitochondrion	58.17	60.78
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	50.43	60.27
AT2G17420.1	Thale cress	mitochondrion, plastid	65.62	59.79
VIT_05s0049g00110.t01	Wine grape	cytosol	18.05	59.43
CDY07845	Canola	plastid	58.17	59.01
CDY30367	Canola	mitochondrion	57.31	58.31
CDX74655	Canola	peroxisome, plastid	28.08	56.98
CDY05719	Canola	cytosol	28.37	55.31
Bra025646.1-P	Field mustard	cytosol	11.75	52.56
CDY58054	Canola	cytosol	15.76	51.4
Bra031685.1-P	Field mustard	cytosol	15.47	50.47
CDX74431	Canola	cytosol	18.91	44.9
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	62.75	42.36
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.18	42.05
CDY70273	Canola	cytosol, peroxisome	14.61	39.84
CDY26805	Canola	vacuole	16.91	38.82
CDY13332	Canola	plastid	29.8	38.1
CDY26807	Canola	cytosol, mitochondrion	64.47	34.04
Zm00001d022381_P016	Maize	plastid	48.71	30.74
Bra025645.1-P	Field mustard	cytosol	17.19	26.91

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	EntrezGene:100272704	Gene3D:3.50.50.60	ProteinID:AQK58784.1	UniProt:B4FQ13
EMBL:BT039201	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114	InterPro:IPR036188
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9
InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI00017B779F
EnsemblPlantsGene:Zm00001d053118	EnsemblPlants:Zm00001d053118_P001	EnsemblPlants:Zm00001d053118_T001	SEG:seg	:	:

Description

Thioredoxin reductase

Coordinates

chr4:-:214485248..214486943

Molecular Weight (calculated)

36741.1 Da

IEP (calculated)

7.501

GRAVY (calculated)

0.055

Length

349 amino acids

Sequence
(BLAST)

001: MEGSAADGPL RTRVCIIGSG PAAHTAAMYA ARADLKPVLF EGWMANGVAA GGQLTTTTVV ENFPGFPAGI MGRDLMKRCR DQSQRFGTRI LTETVTAVDL
101: SARPFRVVAS DKSTTVLADA VIVATGAVAR RLDFPGSDTY WNHGISACAV CDGPAPIFRD RPLAVVGGGD SAMEESSFLT KYGSRVYIVH RRSTFRASKI
201: MQDMVLKNPK IQVVWNSVVV GAFGGADGDG GRPLLAGVKV ENLVSGEVKD LQVAGLFFAI GHTPATEFLG GQLQLDSPSG YVVTKPDSTH TSVKGVFAAG
301: DVQDKKYRQA ITAAGSGCMA ALDVEHYLQE VAVVGAQEGK SVQPLTMLE

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.