Factsheet for Zm00001d022381_P016

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004610_P001
Zm00001d013042_P001
Zm00001d013510_P002
Zm00001d021869_P001
Zm00001d022381_P016
Zm00001d028055_P001
Zm00001d030843_P001
Zm00001d034527_P001
Zm00001d037917_P001
Zm00001d041092_P001
Zm00001d042017_P002
Zm00001d048134_P001
Zm00001d053989_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41680.1	Zm00001d037917_P001	AT1G02870.1	21798944
AT2G41680.1	Zm00001d028055_P001	AT1G49850.1	21798944
AT2G41680.1	Zm00001d030843_P001	AT1G49850.1	21798944
AT2G41680.1	Zm00001d048134_P001	AT1G49850.1	21798944
AT2G41680.1	Zm00001d042017_P002	AT1G76760.1	21798944
AT2G41680.1	Zm00001d022381_P016	AT2G41680.1	21798944
AT2G41680.1	Zm00001d013042_P001	AT3G04860.1	21798944
AT2G41680.1	Zm00001d021869_P001	AT3G04860.1	21798944
AT2G41680.1	Zm00001d034527_P001	AT3G04860.1	21798944
AT2G41680.1	Zm00001d053989_P003	AT4G10930.1	21798944
AT2G41680.1	Zm00001d004610_P001	AT5G40440.1	21798944
AT2G41680.1	Zm00001d013510_P002	AT5G40440.1	21798944
AT2G41680.1	Zm00001d041092_P001	AT5G40440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36845	Sorghum	plastid	91.14	96.18
HORVU2Hr1G023170.1	Barley	cytosol	75.05	86.1
GSMUA_Achr8P09560_001	Banana	cytosol	35.44	84.85
Os07t0657900-02	Rice	plastid	78.3	84.08
TraesCS2B01G154700.1	Wheat	plastid	76.49	81.35
PGSC0003DMT400070106	Potato	cytosol	33.09	79.22
GSMUA_Achr8P09570_001	Banana	cytosol	24.77	78.29
KRH33290	Soybean	nucleus	70.34	74.95
KRH72015	Soybean	nucleus	69.98	74.14
Bra000234.1-P	Field mustard	plastid	68.17	73.78
CDY35405	Canola	plastid	68.17	73.78
Bra004639.1-P	Field mustard	plastid	69.44	73.7
CDY22534	Canola	plastid	67.99	73.58
CDX79923	Canola	mitochondrion, plastid	69.44	71.91
VIT_08s0007g08760.t01	Wine grape	plastid	68.72	71.83
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	73.24	71.55
AT2G41680.1	Thale cress	plastid	68.35	71.46
Solyc10g080080.1.1	Tomato	plastid	69.98	71.27
PGSC0003DMT400060907	Potato	plastid	69.8	71.09
CDY23835	Canola	plastid	69.44	70.72
TraesCS2A01G132200.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.24	67.84
Solyc04g016010.2.1	Tomato	nucleus	62.93	64.8
Zm00001d053118_P001	Maize	cytosol	30.74	48.71
Zm00001d037429_P001	Maize	mitochondrion	32.55	48.65
Zm00001d017823_P001	Maize	cytosol	30.38	47.73
PGSC0003DMT400070103	Potato	plastid	16.82	43.26

Protein Annotations

MapMan:10.5.2	EntrezGene:100216789	Gene3D:3.40.30.10	UniProt:A0A1D6ILW6	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008047	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0010380	GO:GO:0010581	GO:GO:0016491	GO:GO:0016671	GO:GO:0019725
GO:GO:0030234	GO:GO:0042744	GO:GO:0042802	GO:GO:0043085	GO:GO:0045454	GO:GO:0055114
GO:GO:0098869	InterPro:IPR013766	InterPro:IPR036188	ProteinID:ONM60316.1	PFAM:PF00085	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PFscan:PS51352	PANTHER:PTHR42863	PANTHER:PTHR42863:SF1
InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI000842FDDF	EnsemblPlantsGene:Zm00001d022381	EnsemblPlants:Zm00001d022381_P016	EnsemblPlants:Zm00001d022381_T016	SEG:seg	:

Description

NADPH-dependent thioredoxin reductase 3

Coordinates

chr7:+:176479777..176485399

Molecular Weight (calculated)

60297.4 Da

IEP (calculated)

6.858

GRAVY (calculated)

-0.152

Length

553 amino acids

Sequence
(BLAST)

001: MAVTRVAVAA ALSAAPLSSR RHRVALPSAC RLLPASATCC NSRAPMSLQA AAAAPAAGAV DEETPASSPP SDASKGVENL VIIGSGPAGY TAAIYAARAN
101: LKPVVFEGCQ MGGVPGGQLM TTTEVENFPG FPDGITGPDL MDRMRKQAER WGAELYQEDV EFVNVKSSPF VIRSSDREVK CHSLIIATGA TAKRLRLPRE
201: DEFWSRGISA CAICDGASPL FKGQVLAVVG GGDVATEEAV YLTKYARHVH LLVRKDQLRA SKAMQDRWHC KMLYLANKLQ FVGCELVIMV DYGECFRVLN
301: NPNITVHFNT EAMDVVSNDK GQMSGVHLKR RDTGEESVLT VKGLFYGIGH TPNSQLLQGQ IELDSAGYIL VKEGSAKTSV DGVFAAGDVQ DHEWRQAITA
401: AGSGCIAALS VERYLVANDL LVEFHQPVQE ETKKDITDKD VQMGFDISHR KHKGQYALRK LYHESPRLIC VLYTSPTCGP CRTLKPILSK VIDEYGEFVH
501: LVEIDIEEDP EIAEAAGIMG TPCVQFFKNK EMLRTVSGVK RKKEYREFIE ANK

Best Arabidopsis Sequence Match ( AT2G41680.1 )
(BLAST)

001: MAASPKIGIG IASVSSPHRV SAASSALSPP PHLFFLTTTT TTRHGGSYLL RQPTRTRSSD SLRLRVSATA NSPSSSSSGG EIIENVVIIG SGPAGYTAAI
101: YAARANLKPV VFEGYQMGGV PGGQLMTTTE VENFPGFPDG ITGPDLMEKM RKQAERWGAE LYPEDVESLS VTTAPFTVQT SERKVKCHSI IYATGATARR
201: LRLPREEEFW SRGISACAIC DGASPLFKGQ VLAVVGGGDT ATEEALYLTK YARHVHLLVR RDQLRASKAM QDRVINNPNI TVHYNTETVD VLSNTKGQMS
301: GILLRRLDTG EETELEAKGL FYGIGHSPNS QLLEGQVELD SSGYVLVREG TSNTSVEGVF AAGDVQDHEW RQAVTAAGSG CIAALSAERY LTSNNLLVEF
401: HQPQTEEAKK EFTQRDVQEK FDITLTKHKG QYALRKLYHE SPRVILVLYT SPTCGPCRTL KPILNKVVDE YNHDVHFVEI DIEEDQEIAE AAGIMGTPCV
501: QFFKNKEMLR TISGVKMKKE YREFIEANK

Arabidopsis Description

NTRCThioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:A0A178VZE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.