Factsheet for Zm00001d017823_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07372	Sorghum	cytosol, mitochondrion	91.48	97.28
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	86.08	91.54
Os02t0713400-01	Rice	extracellular, plasma membrane	85.51	90.94
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	84.94	90.06
TraesCS6B01G306300.1	Wheat	cytosol	84.94	90.06
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	84.94	90.06
CDY26806	Canola	cytosol, mitochondrion, peroxisome	28.41	78.74
Zm00001d037429_P001	Maize	mitochondrion	81.82	77.84
PGSC0003DMT400048037	Potato	cytosol	72.44	77.74
Solyc03g032000.2.1	Tomato	cytosol, extracellular	71.88	77.13
Zm00001d053118_P001	Maize	cytosol	74.72	75.36
Bra017711.1-P	Field mustard	cytosol	65.34	73.72
GSMUA_Achr9P27590_001	Banana	mitochondrion	73.3	72.88
PGSC0003DMT400035477	Potato	mitochondrion	74.72	71.66
Solyc02g082250.2.1	Tomato	mitochondrion	74.15	71.12
CDY22142	Canola	cytosol	15.06	69.74
CDY72417	Canola	cytosol	15.06	69.74
KRH76499	Soybean	nucleus	72.16	68.65
VIT_04s0044g01750.t01	Wine grape	mitochondrion	73.01	68.53
CDY40633	Canola	mitochondrion	70.74	68.41
CDY41653	Canola	mitochondrion	72.16	67.91
CDY24812	Canola	mitochondrion	71.88	67.83
CDX72537	Canola	mitochondrion	69.32	67.78
KRH28954	Soybean	nucleus	71.31	67.47
AT4G35460.1	Thale cress	mitochondrion, plastid	71.88	67.47
Bra037274.1-P	Field mustard	mitochondrion	63.35	66.77
Bra010533.1-P	Field mustard	mitochondrion	66.76	66.76
AT2G17420.1	Thale cress	mitochondrion, plastid	71.59	65.8
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	55.68	65.77
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	54.55	65.75
CDX74655	Canola	peroxisome, plastid	32.1	65.7
VIT_05s0049g00110.t01	Wine grape	cytosol	19.6	65.09
CDY30367	Canola	mitochondrion	62.5	64.14
CDY07845	Canola	plastid	62.22	63.66
KRH07823	Soybean	mitochondrion	69.32	61.93
Bra025646.1-P	Field mustard	cytosol	13.64	61.54
CDY05719	Canola	cytosol	30.4	59.78
CDY58054	Canola	cytosol	17.33	57.01
Bra031685.1-P	Field mustard	cytosol	17.05	56.07
CDX74431	Canola	cytosol	20.45	48.98
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	67.05	45.65
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.76	45.54
CDY70273	Canola	cytosol, peroxisome	15.62	42.97
CDY13332	Canola	plastid	33.24	42.86
CDY26805	Canola	vacuole	18.18	42.11
CDY26807	Canola	cytosol, mitochondrion	68.18	36.31
Zm00001d022381_P016	Maize	plastid	47.73	30.38
Bra025645.1-P	Field mustard	cytosol	17.9	28.25

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	UniProt:A0A1D6HI32	ProteinID:AQK74170.1	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0019430	GO:GO:0055114	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368
PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0008455CA7	EnsemblPlantsGene:Zm00001d017823	EnsemblPlants:Zm00001d017823_P001
EnsemblPlants:Zm00001d017823_T001	SEG:seg	:	:	:	:

Description

Thioredoxin reductase

Coordinates

chr5:-:207755678..207763421

Molecular Weight (calculated)

37313.4 Da

IEP (calculated)

5.860

GRAVY (calculated)

0.030

Length

352 amino acids

Sequence
(BLAST)

001: MEGSAAAPLR TRICIIGSGP AAHTAAIYAA RAELKPVLFE GWMANDIAAG GQLTTTTDVE NFPGFPNGIM GADLMDNCRA QSLRFGTNIL SETVTAVDFS
101: ACPFRVSADS TTVLADAVIV ATGAVARRLH FPGSDAYWNR GISACAVCDG AAPIFRNKPI AVIGGGDSAM EESNFLTKYG SHVYIIHRRN TFRASKIMQA
201: RALENPKIKV LWDSEVVEAY GGANGGPLAG VKVKNLLNGE VSDLQVSGLF FAIGHEPATK FLGGQLELDS DGYVETKPGS THTSVKGVFA AGDVQDKKYR
301: QAITAAGSGF TLLLMINVHT YQSGELLFPW CMAALDAEHY LQEIGAQEGK SD

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.