Factsheet for Bra017711.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40633	Canola	mitochondrion	100.0	85.71
Bra010533.1-P	Field mustard	mitochondrion	87.82	77.84
AT4G35460.1	Thale cress	mitochondrion, plastid	87.5	72.8
PGSC0003DMT400048037	Potato	cytosol	74.04	70.43
Solyc03g032000.2.1	Tomato	cytosol, extracellular	73.4	69.82
Bra037274.1-P	Field mustard	mitochondrion	74.68	69.76
EES07372	Sorghum	cytosol, mitochondrion	73.72	69.49
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	64.1	68.49
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	72.76	68.37
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	72.76	68.37
TraesCS6B01G306300.1	Wheat	cytosol	72.76	68.37
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	72.44	68.28
Os02t0713400-01	Rice	extracellular, plasma membrane	72.12	67.98
Bra025646.1-P	Field mustard	cytosol	16.99	67.95
PGSC0003DMT400035477	Potato	mitochondrion	77.56	65.94
KRH76499	Soybean	nucleus	77.88	65.68
Solyc02g082250.2.1	Tomato	mitochondrion	77.24	65.67
Zm00001d017823_P001	Maize	cytosol	73.72	65.34
KRH28954	Soybean	nucleus	77.24	64.78
EES09948	Sorghum	mitochondrion	68.91	63.42
Zm00001d037429_P001	Maize	mitochondrion	74.36	62.7
TraesCS7B01G194200.1	Wheat	golgi	74.04	62.6
EER89710	Sorghum	mitochondrion	74.36	62.53
TraesCS7A01G225400.2	Wheat	mitochondrion	73.72	61.99
TraesCS7D01G229100.1	Wheat	mitochondrion	73.08	61.79
Zm00001d053118_P001	Maize	cytosol	67.63	60.46
GSMUA_Achr9P27590_001	Banana	mitochondrion	67.31	59.32
HORVU7Hr1G046890.1	Barley	plastid	73.08	58.76
KRH07823	Soybean	mitochondrion	73.72	58.38
Bra031685.1-P	Field mustard	cytosol	19.87	57.94
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	82.37	49.81
Bra000234.1-P	Field mustard	plastid	51.6	31.51
Os04t0524136-00	Rice	plastid	19.55	30.65
Bra004639.1-P	Field mustard	plastid	50.96	30.52
Bra025645.1-P	Field mustard	cytosol	20.51	28.7

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra017711	EnsemblPlants:Bra017711.1	EnsemblPlants:Bra017711.1-P
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0019430	GO:GO:0055114	InterPro:IPR036188	UniProt:M4DMH6
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9
InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI0002540B57
SEG:seg	:	:	:	:	:

Description

AT4G35460 (E=3e-140) ATNTRB, NTRB, NTR1 | NTRB (NADPH-DEPENDENT THIOREDOXIN REDUCTASE B); thioredoxin-disulfide reductase

Coordinates

chrA03:+:29925954..29926892

Molecular Weight (calculated)

32737.8 Da

IEP (calculated)

6.146

GRAVY (calculated)

-0.003

Length

312 amino acids

Sequence
(BLAST)

001: MNGLETHNTN LCIVGSGPAA HTAAIYAARA ELNPLLFEGW MANDIAPGGQ LTTTTDVENF PGFPDGILGA DLTDNFRRQS ERFGAKIFTE TVTKVDFSSK
101: PFKLFTDSRA VIADAVILAT GAVAKRLTFP GSGEGTGGFW NRGISACAVC DGAAPIFRGK PLAVIGGGDS AMEEASFLTK YGSKVSIIHR RDAFRASKIM
201: QQRVFANPKI DVVWNSTVVE AYGDGERGGV LGGLKVKNVV TGDVEDLRVS GLFFAIGHEP ATRFLGGAVE LDSDGYVVTK AGTTETSVAG VFAAGDVQDK
301: KYRQAVTAAG TG

Best Arabidopsis Sequence Match ( AT4G35460.1 )
(BLAST)

001: MNCVSRLKCL ISKARSFARL GGESTLSQPP SLASAAFSSS AVMNGLETHN TRLCIVGSGP AAHTAAIYAA RAELKPLLFE GWMANDIAPG GQLTTTTDVE
101: NFPGFPEGIL GVELTDKFRK QSERFGTTIF TETVTKVDFS SKPFKLFTDS KAILADAVIL ATGAVAKRLS FVGSGEASGG FWNRGISACA VCDGAAPIFR
201: NKPLAVIGGG DSAMEEANFL TKYGSKVYII HRRDAFRASK IMQQRALSNP KIDVIWNSSV VEAYGDGERD VLGGLKVKNV VTGDVSDLKV SGLFFAIGHE
301: PATKFLDGGV ELDSDGYVVT KPGTTQTSVP GVFAAGDVQD KKYRQAITAA GTGCMAALDA EHYLQEIGSQ QGKSD

Arabidopsis Description

NTR1Thioredoxin reductase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39243]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.