Factsheet for Bra025645.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70273	Canola	cytosol, peroxisome	21.08	36.72
Bra017711.1-P	Field mustard	cytosol	28.7	20.51
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	30.04	20.24
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	30.04	20.18
TraesCS6B01G306300.1	Wheat	cytosol	29.6	19.88
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	29.6	19.88
Bra037274.1-P	Field mustard	mitochondrion	29.15	19.46
EES07372	Sorghum	cytosol, mitochondrion	28.7	19.34
Os02t0713400-01	Rice	extracellular, plasma membrane	28.25	19.03
Bra010533.1-P	Field mustard	mitochondrion	29.15	18.47
Solyc03g032000.2.1	Tomato	cytosol, extracellular	26.46	17.99
PGSC0003DMT400048037	Potato	cytosol	26.46	17.99
Zm00001d017823_P001	Maize	cytosol	28.25	17.9
TraesCS7B01G194200.1	Wheat	golgi	29.6	17.89
TraesCS7D01G229100.1	Wheat	mitochondrion	29.6	17.89
TraesCS7A01G225400.2	Wheat	mitochondrion	29.6	17.79
KRH76499	Soybean	nucleus	29.15	17.57
Zm00001d037429_P001	Maize	mitochondrion	28.7	17.3
KRH28954	Soybean	nucleus	28.7	17.2
Zm00001d053118_P001	Maize	cytosol	26.91	17.19
HORVU7Hr1G046890.1	Barley	plastid	29.6	17.01
GSMUA_Achr9P27590_001	Banana	mitochondrion	26.91	16.95
PGSC0003DMT400035477	Potato	mitochondrion	27.8	16.89
Solyc02g082250.2.1	Tomato	mitochondrion	27.8	16.89
EES09948	Sorghum	mitochondrion	25.56	16.81
EER89710	Sorghum	mitochondrion	27.8	16.71
KRH07823	Soybean	mitochondrion	28.7	16.24
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	19.73	15.07
Os04t0524136-00	Rice	plastid	12.11	13.57
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	30.04	12.98
Bra000234.1-P	Field mustard	plastid	21.52	9.39
Bra004639.1-P	Field mustard	plastid	21.52	9.21
Bra031685.1-P	Field mustard	cytosol	2.69	5.61
Bra025646.1-P	Field mustard	cytosol	1.35	3.85

Protein Annotations

EnsemblPlants:Bra025645.1	EnsemblPlants:Bra025645.1-P	EnsemblPlantsGene:Bra025645	Gene3D:3.50.50.60	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002544B3C	UniProt:M4EA38	MapMan:10.5.2	:	:

Description

AT2G17420 (E=5e-018) NTRA, ATNTRA, NTR2 | NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A); thioredoxin-disulfide reductase

Coordinates

chrA04:-:7293222..7294070

Molecular Weight (calculated)

25009.0 Da

IEP (calculated)

8.335

GRAVY (calculated)

-0.232

Length

223 amino acids

Sequence
(BLAST)

001: MANNIAPSGQ LTTNTDAENL PGFPKGILGI DIVDKFHKQS ERFGTEIFTE RSRRSISPRG HSSSSPIREL CSPTHRCRHH LHRSCCETAE LCRIWAYAVC
101: DGATPIFTNK IVLMTVPDSG AIRVTVPDSG ATRVTVLDRA EQPECMFQRQ RFLRKLQPIS GFALISLFSL PAACGFDISS FYVSPDYFAL FLEKKPDLRV
201: GDLRFCYFVK GEGHLSRLRE EPP

Best Arabidopsis Sequence Match ( AT2G17420.2 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT G

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.