Factsheet for HORVU6Hr1G070120.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	97.28	96.99
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	97.28	96.99
TraesCS6B01G306300.1	Wheat	cytosol	96.98	96.69
EES07372	Sorghum	cytosol, mitochondrion	92.45	92.45
Os02t0713400-01	Rice	extracellular, plasma membrane	90.94	90.94
Zm00001d017823_P001	Maize	cytosol	91.54	86.08
CDY26806	Canola	cytosol, mitochondrion, peroxisome	30.51	79.53
Solyc03g032000.2.1	Tomato	cytosol, extracellular	77.95	78.66
PGSC0003DMT400048037	Potato	cytosol	77.95	78.66
EES09948	Sorghum	mitochondrion	78.85	76.99
HORVU7Hr1G046890.1	Barley	plastid	87.92	75.0
Zm00001d053118_P001	Maize	cytosol	77.95	73.93
Bra017711.1-P	Field mustard	cytosol	68.28	72.44
GSMUA_Achr9P27590_001	Banana	mitochondrion	77.04	72.03
PGSC0003DMT400035477	Potato	mitochondrion	79.15	71.39
Solyc02g082250.2.1	Tomato	mitochondrion	79.15	71.39
CDY22142	Canola	cytosol	15.71	68.42
CDY72417	Canola	cytosol	15.71	68.42
KRH76499	Soybean	nucleus	76.13	68.11
CDY40633	Canola	mitochondrion	73.72	67.03
CDX72537	Canola	mitochondrion	72.81	66.94
KRH28954	Soybean	nucleus	75.23	66.94
AT4G35460.1	Thale cress	mitochondrion, plastid	75.83	66.93
VIT_04s0044g01750.t01	Wine grape	mitochondrion	75.83	66.93
CDX74655	Canola	peroxisome, plastid	34.74	66.86
Bra037274.1-P	Field mustard	mitochondrion	67.37	66.77
CDY41653	Canola	mitochondrion	75.23	66.58
CDY24812	Canola	mitochondrion	74.92	66.49
AT2G17420.1	Thale cress	mitochondrion, plastid	76.44	66.06
Bra024516.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	58.01	65.75
Bra010533.1-P	Field mustard	mitochondrion	69.79	65.62
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	58.91	65.44
CDY07845	Canola	plastid	66.77	64.24
CDY30367	Canola	mitochondrion	66.47	64.14
Bra025646.1-P	Field mustard	cytosol	14.8	62.82
KRH07823	Soybean	mitochondrion	74.02	62.18
VIT_05s0049g00110.t01	Wine grape	cytosol	19.64	61.32
CDY05719	Canola	cytosol	31.42	58.1
CDY58054	Canola	cytosol	18.73	57.94
Bra031685.1-P	Field mustard	cytosol	18.43	57.01
CDX74431	Canola	cytosol	22.05	49.66
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	71.3	45.65
Bra037273.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.0	45.54
CDY70273	Canola	cytosol, peroxisome	16.92	43.75
CDY13332	Canola	plastid	35.65	43.22
CDY26805	Canola	vacuole	19.64	42.76
CDY26807	Canola	cytosol, mitochondrion	73.11	36.61
HORVU2Hr1G023170.1	Barley	cytosol	48.34	33.2
Bra025645.1-P	Field mustard	cytosol	20.24	30.04

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.50.50.60	EMBL:AK354028	UniProt:F2CQX6	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0019430	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G070120	EnsemblPlants:HORVU6Hr1G070120.1	InterPro:IPR036188
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9
InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	UniParc:UPI000152AF5C
SEG:seg	:	:	:	:	:

Description

Thioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:F2CQX6]

Coordinates

chrchr6H:-:487377050..487385882

Molecular Weight (calculated)

34769.2 Da

IEP (calculated)

6.163

GRAVY (calculated)

0.014

Length

331 amino acids

Sequence
(BLAST)

001: MEGSAAAPLR TRVCIIGSGP AAHTAAIYAA RAELKPVLFE GWMANDIAAG GQLTTTTDVE NFPGFPTGIM GIDLMDNCRA QSVRFGTNIL SETVTEVDFS
101: ARPFRVTSDS TTVLADTVVV ATGAVARRLH FSGSDTYWNR GISACAVCDG AAPIFRNKPI AVIGGGDSAM EEGNFLTKYG SQVYIIHRRN TFRASKIMQA
201: RALSNPKIQV VWDSEVVEAY GGAGGGPLAG VKVKNLVTGE VSDLQVSGLF FAIGHEPATK FLNGQLELHA DGYVATKPGS THTSVEGVFA AGDVQDKKYR
301: QAITAAGSGC MAALDAEHYL QEVGAQVGKS D

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.