CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26806	Canola	cytosol, mitochondrion, peroxisome	34.88	94.49
CDY30367	Canola	mitochondrion	91.86	92.13
CDY72417	Canola	cytosol	17.44	78.95
CDY22142	Canola	cytosol	17.44	78.95
AT2G17420.1	Thale cress	mitochondrion, plastid	86.34	77.55
CDY66403	Canola	cytosol, nucleus, peroxisome, plastid	63.37	73.15
PGSC0003DMT400048037	Potato	cytosol	67.44	70.73
CDX72537	Canola	mitochondrion	73.84	70.56
Solyc03g032000.2.1	Tomato	cytosol, extracellular	67.15	70.43
CDY40633	Canola	mitochondrion	74.13	70.05
CDY41653	Canola	mitochondrion	75.87	69.79
CDY24812	Canola	mitochondrion	75.29	69.44
TraesCS6A01G278000.1	Wheat	cytosol, mitochondrion	65.12	67.47
TraesCS6D01G258600.1	Wheat	extracellular, golgi, unclear	65.12	67.47
Os02t0713400-01	Rice	extracellular, plasma membrane	64.83	67.37
TraesCS6B01G306300.1	Wheat	cytosol	64.83	67.17
HORVU6Hr1G070120.1	Barley	cytosol, mitochondrion	64.24	66.77
PGSC0003DMT400035477	Potato	mitochondrion	71.22	66.76
KRH76499	Soybean	nucleus	71.51	66.49
Solyc02g082250.2.1	Tomato	mitochondrion	70.93	66.48
EES07372	Sorghum	cytosol, mitochondrion	63.95	66.47
CDY58054	Canola	cytosol	20.64	66.36
KRH28954	Soybean	nucleus	70.64	65.32
CDX74655	Canola	peroxisome, plastid	32.56	65.12
CDY26805	Canola	vacuole	28.49	64.47
GSMUA_Achr9P27590_001	Banana	mitochondrion	65.7	63.84
TraesCS7B01G194200.1	Wheat	golgi	67.44	62.87
EER89710	Sorghum	mitochondrion	67.15	62.26
Zm00001d017823_P001	Maize	cytosol	63.66	62.22
Zm00001d037429_P001	Maize	mitochondrion	66.86	62.16
TraesCS7D01G229100.1	Wheat	mitochondrion	66.57	62.06
TraesCS7A01G225400.2	Wheat	mitochondrion	66.86	61.99
EES09948	Sorghum	mitochondrion	59.88	60.77
HORVU7Hr1G046890.1	Barley	plastid	66.86	59.28
CDY05719	Canola	cytosol	30.81	59.22
CDX74431	Canola	cytosol	25.29	59.18
Zm00001d053118_P001	Maize	cytosol	59.01	58.17
KRH07823	Soybean	mitochondrion	66.57	58.12
CDY70273	Canola	cytosol, peroxisome	20.93	56.25
CDY30366	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	76.74	51.06
CDY13332	Canola	plastid	33.14	41.76
CDY26807	Canola	cytosol, mitochondrion	78.78	41.0
CDY22534	Canola	plastid	45.93	30.92
CDY35405	Canola	plastid	45.93	30.92
Os04t0524136-00	Rice	plastid	17.73	30.65
CDX79923	Canola	mitochondrion, plastid	45.35	29.21
CDY23835	Canola	plastid	45.64	28.91

Protein Annotations

MapMan:10.5.2	Gene3D:3.50.50.60	GO:A0A078F0A1	UniProt:A0A078F0A1	EnsemblPlants:CDY07845	ProteinID:CDY07845
ProteinID:CDY07845.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00125003001	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PANTHER:PTHR42863	PANTHER:PTHR42863:SF9	InterPro:Pyr_nucl-diS_OxRdtase_2_AS
InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI0004EE50F1	SEG:seg	:	:

Description

BnaC03g47770DBnaC03g47770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F0A1]

Coordinates

chrLK031981:-:456345..459052

Molecular Weight (calculated)

35707.7 Da

IEP (calculated)

6.150

GRAVY (calculated)

0.117

Length

344 amino acids

Sequence
(BLAST)

001: MCVGLVSMSQ LKSILSRAGA LLLGSALSAS ALNAPSLSSS AAMETHKTKV CIVGSGPAAH TAAIYAARAE LKPLLFEGWM ANDIAPGGQL TTTTDVENFP
101: GFPEGILGID IVEKFRKQSE RFGTKIFTET VNKVDFSSRP FKLFTDSRTV LADSVIISTG AVAKRLSFAG SGEGAGGFWN RGISACAVCD GAAPIFRNKP
201: LVVIGGGDSA MEEANFLTKY GSKAYGDEDG KGVLGGLKVK NVVTGVVSDL KVSGLFFAIG HEPATKFLDG QLELDEDGYV VTKPGTTKTS VVGVFAAGDV
301: QDKKYRQAIT AAGTGCMAAL DAEHYLQEIG SQEVGAESGL CAKL

Best Arabidopsis Sequence Match ( AT2G17420.1 )
(BLAST)

001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD

Arabidopsis Description

NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.