Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70273 | Canola | cytosol, peroxisome | 26.97 | 32.03 |
| CDY30367 | Canola | mitochondrion | 71.71 | 31.78 |
| Bra037274.1-P | Field mustard | mitochondrion | 68.42 | 31.14 |
| CDY07845 | Canola | plastid | 64.47 | 28.49 |
| Os04t0524136-00 | Rice | plastid | 32.24 | 24.62 |
| CDY24812 | Canola | mitochondrion | 54.61 | 22.25 |
| CDX72537 | Canola | mitochondrion | 52.63 | 22.22 |
| CDY41653 | Canola | mitochondrion | 54.61 | 22.19 |
| PGSC0003DMT400035477 | Potato | mitochondrion | 51.97 | 21.53 |
| CDY40633 | Canola | mitochondrion | 51.32 | 21.43 |
| Solyc02g082250.2.1 | Tomato | mitochondrion | 50.66 | 20.98 |
| GSMUA_Achr9P27590_001 | Banana | mitochondrion | 48.68 | 20.9 |
| KRH76499 | Soybean | nucleus | 50.0 | 20.54 |
| TraesCS7A01G225400.2 | Wheat | mitochondrion | 50.0 | 20.49 |
| Solyc03g032000.2.1 | Tomato | cytosol, extracellular | 43.42 | 20.12 |
| PGSC0003DMT400048037 | Potato | cytosol | 43.42 | 20.12 |
| TraesCS7B01G194200.1 | Wheat | golgi | 48.68 | 20.05 |
| TraesCS7D01G229100.1 | Wheat | mitochondrion | 48.68 | 20.05 |
| KRH28954 | Soybean | nucleus | 48.68 | 19.89 |
| TraesCS6A01G278000.1 | Wheat | cytosol, mitochondrion | 43.42 | 19.88 |
| TraesCS6B01G306300.1 | Wheat | cytosol | 43.42 | 19.88 |
| TraesCS6D01G258600.1 | Wheat | extracellular, golgi, unclear | 43.42 | 19.88 |
| Os02t0713400-01 | Rice | extracellular, plasma membrane | 42.76 | 19.64 |
| EES07372 | Sorghum | cytosol, mitochondrion | 42.76 | 19.64 |
| HORVU6Hr1G070120.1 | Barley | cytosol, mitochondrion | 42.76 | 19.64 |
| Zm00001d037429_P001 | Maize | mitochondrion | 46.71 | 19.19 |
| EER89710 | Sorghum | mitochondrion | 46.71 | 19.14 |
| HORVU7Hr1G046890.1 | Barley | plastid | 48.68 | 19.07 |
| Zm00001d017823_P001 | Maize | cytosol | 42.11 | 18.18 |
| EES09948 | Sorghum | mitochondrion | 38.82 | 17.4 |
| KRH07823 | Soybean | mitochondrion | 44.74 | 17.26 |
| Zm00001d053118_P001 | Maize | cytosol | 38.82 | 16.91 |
| CDY30366 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 50.0 | 14.7 |
| CDY35405 | Canola | plastid | 40.13 | 11.94 |
| CDY22534 | Canola | plastid | 40.13 | 11.94 |
| CDY26807 | Canola | cytosol, mitochondrion | 49.34 | 11.35 |
| CDX79923 | Canola | mitochondrion, plastid | 38.16 | 10.86 |
| CDY23835 | Canola | plastid | 38.16 | 10.68 |
| CDX74655 | Canola | peroxisome, plastid | 5.92 | 5.23 |
| CDY13332 | Canola | plastid | 9.21 | 5.13 |
| CDY05719 | Canola | cytosol | 5.26 | 4.47 |
| CDY66403 | Canola | cytosol, nucleus, peroxisome, plastid | 7.89 | 4.03 |
| CDY22142 | Canola | cytosol | 1.97 | 3.95 |
| CDY72417 | Canola | cytosol | 1.97 | 3.95 |
| CDY58054 | Canola | cytosol | 2.63 | 3.74 |
| CDX74431 | Canola | cytosol | 2.63 | 2.72 |
| CDY26806 | Canola | cytosol, mitochondrion, peroxisome | 1.97 | 2.36 |
Protein Annotations
| MapMan:10.5.2 | Gene3D:3.50.50.60 | GO:A0A078GJT6 | UniProt:A0A078GJT6 | EnsemblPlants:CDY26805 | ProteinID:CDY26805 |
| ProteinID:CDY26805.1 | InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00035749001 | InterPro:IPR036188 | PFAM:PF07992 |
| PRINTS:PR00469 | PANTHER:PTHR42863 | PANTHER:PTHR42863:SF9 | InterPro:Pyridine_nuc-diS_OxRdtase_2 | SUPFAM:SSF51905 | SignalP:SignalP-noTM |
| UniParc:UPI0004EEF252 | SEG:seg | : | : | : | : |
Description
BnaC09g09320DBnaC09g09320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJT6]
Coordinates
chrLK032194:+:346926..347403
Molecular Weight (calculated)
15920.2 Da
IEP (calculated)
8.068
GRAVY (calculated)
0.161
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MCWISMSQLK LLLSRAGGFL LVSVLSASAL NAPSLASSAS SSSPAAMETH KTKVCIVGSG PAAHTAAIYA ARAELKPLLF EGWMANDIAP GGQLTTTTDV
101: ENFPGFPEGI LGIEIVENDS APRSSPRRLI RLISPRSRLS CSPIQEPSSP TL
101: ENFPGFPEGI LGIEIVENDS APRSSPRRLI RLISPRSRLS CSPIQEPSSP TL
001: MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
101: LTTTTDVENF PGFPEGILGI DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT GSGEGNGGFW NRGISACAVC
201: DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG
301: LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT GCMAALDAEH YLQEIGSQEG KSD
Arabidopsis Description
NTR2Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.